Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH1Q9Y2L9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 AC092384.3-202ENST00000564646 2873 ntBASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
LRCH1Q9Y2L9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 AP000593.1-201ENST00000393668 712 ntBASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 KRT17P3-201ENST00000420566 1262 ntBASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
LRCH1Q9Y2L9 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 AC128676.1-201ENST00000454392 318 ntBASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 AC005829.2-201ENST00000571422 1056 ntBASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 AC008403.3-201ENST00000598924 454 ntBASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LRCH1Q9Y2L9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH1Q9Y2L9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms