Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.8
SCAF1Q9H7N4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.8
SCAF1Q9H7N4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 MINOS1P3-201ENST00000457048 203 ntBASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCAF1Q9H7N4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 RFPL4AP1-201ENST00000530883 850 ntBASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 AC022148.2-201ENST00000586176 560 ntBASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 AC008608.2-201ENST00000606089 416 ntBASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 FAM197Y3-203ENST00000618346 717 ntBASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SCAF1Q9H7N4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 AL596442.2-201ENST00000610240 980 ntBASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 AC124864.1-201ENST00000623408 392 ntBASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF1Q9H7N4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 VENTXP7-201ENST00000475503 772 ntBASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 AC107308.1-201ENST00000615897 301 ntBASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 AL355877.3-201ENST00000622820 899 ntBASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms