Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 AC138932.1-201ENST00000534164 6830 ntBASIC18.24■□□□□ 0.51
RNF38Q9H0F5 LTB4R2-202ENST00000528054 3092 ntBASIC18.24■□□□□ 0.51
RNF38Q9H0F5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 KLF4P1-201ENST00000412782 1185 ntBASIC18.24■□□□□ 0.51
RNF38Q9H0F5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 UNC93B6-202ENST00000528242 690 ntBASIC18.24■□□□□ 0.51
RNF38Q9H0F5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 AL356488.2-201ENST00000602755 427 ntBASIC18.24■□□□□ 0.51
RNF38Q9H0F5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF38Q9H0F5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 AC003669.1-201ENST00000334569 611 ntBASIC18.23■□□□□ 0.51
RNF38Q9H0F5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 Z83851.2-201ENST00000609564 659 ntBASIC18.23■□□□□ 0.51
RNF38Q9H0F5 AL589182.2-201ENST00000619332 1049 ntBASIC18.23■□□□□ 0.51
RNF38Q9H0F5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF38Q9H0F5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 SIGLEC30P-201ENST00000455569 941 ntBASIC18.22■□□□□ 0.51
RNF38Q9H0F5 STK19B-204ENST00000512515 211 ntBASIC18.22■□□□□ 0.51
RNF38Q9H0F5 IGHV3-52-201ENST00000519770 353 ntBASIC18.22■□□□□ 0.51
RNF38Q9H0F5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 TERC-201ENST00000602385 541 ntBASIC18.22■□□□□ 0.51
RNF38Q9H0F5 AC004706.3-202ENST00000621574 984 ntBASIC18.22■□□□□ 0.51
RNF38Q9H0F5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF38Q9H0F5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms