Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.21■□□□□ 0.51
IFT43Q96FT9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.21■□□□□ 0.51
IFT43Q96FT9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.21■□□□□ 0.51
IFT43Q96FT9 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.21■□□□□ 0.51
IFT43Q96FT9 KRT18P65-201ENST00000439811 1286 ntBASIC18.21■□□□□ 0.51
IFT43Q96FT9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.21■□□□□ 0.51
IFT43Q96FT9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.21■□□□□ 0.51
IFT43Q96FT9 AC111152.3-201ENST00000569699 673 ntBASIC18.21■□□□□ 0.51
IFT43Q96FT9 RNF126P1-202ENST00000569893 925 ntBASIC18.21■□□□□ 0.51
IFT43Q96FT9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.21■□□□□ 0.51
IFT43Q96FT9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.21■□□□□ 0.51
IFT43Q96FT9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.21■□□□□ 0.51
IFT43Q96FT9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
IFT43Q96FT9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 AC008764.6-201ENST00000595909 2069 ntBASIC18.21■□□□□ 0.51
IFT43Q96FT9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.21■□□□□ 0.5
IFT43Q96FT9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
IFT43Q96FT9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
IFT43Q96FT9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
IFT43Q96FT9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
IFT43Q96FT9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
IFT43Q96FT9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
IFT43Q96FT9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.2■□□□□ 0.5
IFT43Q96FT9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.2■□□□□ 0.5
IFT43Q96FT9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.2■□□□□ 0.5
IFT43Q96FT9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.2■□□□□ 0.5
IFT43Q96FT9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.2■□□□□ 0.5
IFT43Q96FT9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.2■□□□□ 0.5
IFT43Q96FT9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.2■□□□□ 0.5
IFT43Q96FT9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
IFT43Q96FT9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.2■□□□□ 0.5
IFT43Q96FT9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.2■□□□□ 0.5
IFT43Q96FT9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.2■□□□□ 0.5
IFT43Q96FT9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
IFT43Q96FT9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.2■□□□□ 0.5
IFT43Q96FT9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
IFT43Q96FT9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IFT43Q96FT9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IFT43Q96FT9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IFT43Q96FT9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
IFT43Q96FT9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IFT43Q96FT9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IFT43Q96FT9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IFT43Q96FT9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
IFT43Q96FT9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
IFT43Q96FT9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IFT43Q96FT9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IFT43Q96FT9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IFT43Q96FT9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IFT43Q96FT9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 TPSP2-201ENST00000561760 610 ntBASIC18.19■□□□□ 0.5
IFT43Q96FT9 AL390719.2-201ENST00000606993 987 ntBASIC18.19■□□□□ 0.5
IFT43Q96FT9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 AC009154.2-201ENST00000621177 724 ntBASIC18.19■□□□□ 0.5
IFT43Q96FT9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IFT43Q96FT9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IFT43Q96FT9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
IFT43Q96FT9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms