Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 GPS2P2-201ENST00000430745 888 ntBASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 KLF2P3-201ENST00000451977 1087 ntBASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 MEIS3P1-201ENST00000495167 958 ntBASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 AP001059.3-201ENST00000619053 235 ntBASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 FO538757.1-201ENST00000623083 1397 ntBASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM43Q96BQ3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19■□□□□ 0.63
TRIM43Q96BQ3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM43Q96BQ3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM43Q96BQ3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM43Q96BQ3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM43Q96BQ3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM43Q96BQ3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TRIM43Q96BQ3 KRT18P32-201ENST00000424695 1287 ntBASIC19■□□□□ 0.63
TRIM43Q96BQ3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19■□□□□ 0.63
TRIM43Q96BQ3 DUX4L17-201ENST00000557360 1267 ntBASIC19■□□□□ 0.63
TRIM43Q96BQ3 AC243562.1-201ENST00000560672 389 ntBASIC19■□□□□ 0.63
TRIM43Q96BQ3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19■□□□□ 0.63
TRIM43Q96BQ3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM43Q96BQ3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19■□□□□ 0.63
TRIM43Q96BQ3 AL008721.1-201ENST00000609964 604 ntBASIC19■□□□□ 0.63
TRIM43Q96BQ3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19■□□□□ 0.63
TRIM43Q96BQ3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM43Q96BQ3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM43Q96BQ3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM43Q96BQ3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM43Q96BQ3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM43Q96BQ3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM43Q96BQ3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM43Q96BQ3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM43Q96BQ3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM43Q96BQ3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM43Q96BQ3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 FAM207CP-201ENST00000443486 507 ntBASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM43Q96BQ3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 AC107890.1-201ENST00000422478 521 ntBASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 SLC25A39P2-201ENST00000537614 270 ntBASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM43Q96BQ3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms