Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
TMEM54Q969K7 AC141586.5-201ENST00000624546 2050 ntBASIC15.53■□□□□ 0.08
TMEM54Q969K7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM54Q969K7 AC016396.2-201ENST00000562575 1417 ntBASIC15.52■□□□□ 0.08
TMEM54Q969K7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
TMEM54Q969K7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.52■□□□□ 0.08
TMEM54Q969K7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM54Q969K7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.52■□□□□ 0.08
TMEM54Q969K7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
TMEM54Q969K7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM54Q969K7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM54Q969K7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM54Q969K7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM54Q969K7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TMEM54Q969K7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEM54Q969K7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM54Q969K7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM54Q969K7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.52■□□□□ 0.08
TMEM54Q969K7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.52■□□□□ 0.08
TMEM54Q969K7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEM54Q969K7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.52■□□□□ 0.08
TMEM54Q969K7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEM54Q969K7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEM54Q969K7 AL023806.1-201ENST00000603994 1649 ntBASIC15.52■□□□□ 0.08
TMEM54Q969K7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TMEM54Q969K7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM54Q969K7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.52■□□□□ 0.07
TMEM54Q969K7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.52■□□□□ 0.07
TMEM54Q969K7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.52■□□□□ 0.07
TMEM54Q969K7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM54Q969K7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.52■□□□□ 0.07
TMEM54Q969K7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
TMEM54Q969K7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.52■□□□□ 0.07
TMEM54Q969K7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.52■□□□□ 0.07
TMEM54Q969K7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM54Q969K7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.52■□□□□ 0.07
TMEM54Q969K7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM54Q969K7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM54Q969K7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM54Q969K7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM54Q969K7 AC139713.2-201ENST00000641328 2723 ntBASIC15.52■□□□□ 0.07
TMEM54Q969K7 AL645608.8-201ENST00000606034 2086 ntBASIC15.52■□□□□ 0.07
TMEM54Q969K7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM54Q969K7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM54Q969K7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM54Q969K7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM54Q969K7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM54Q969K7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM54Q969K7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM54Q969K7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM54Q969K7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 STK25P1-201ENST00000585406 838 ntBASIC15.51■□□□□ 0.07
TMEM54Q969K7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM54Q969K7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM54Q969K7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM54Q969K7 AC090340.1-201ENST00000620778 4980 ntBASIC15.51■□□□□ 0.07
TMEM54Q969K7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM54Q969K7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 CROCCP2-202ENST00000412962 2773 ntBASIC15.51■□□□□ 0.07
TMEM54Q969K7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM54Q969K7 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.51■□□□□ 0.07
TMEM54Q969K7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM54Q969K7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM54Q969K7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM54Q969K7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TMEM54Q969K7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM54Q969K7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.5■□□□□ 0.07
TMEM54Q969K7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM54Q969K7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM54Q969K7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM54Q969K7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM54Q969K7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM54Q969K7 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.5■□□□□ 0.07
TMEM54Q969K7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM54Q969K7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM54Q969K7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TMEM54Q969K7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM54Q969K7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TMEM54Q969K7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TMEM54Q969K7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM54Q969K7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM54Q969K7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
TMEM54Q969K7 HCG4P8-203ENST00000443049 980 ntBASIC15.5■□□□□ 0.07
TMEM54Q969K7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM54Q969K7 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms