Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RTN4IP1Q8WWV3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 AC100803.2-201ENST00000562459 1963 ntBASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 AL024508.2-201ENST00000607749 1894 ntBASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 MIR3917-201ENST00000580971 93 ntBASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 AC140113.3-201ENST00000605663 199 ntBASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 AL031432.5-201ENST00000641059 760 ntBASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RTN4IP1Q8WWV3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 AC005521.1-201ENST00000393351 872 ntBASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 COX11P1-201ENST00000489116 835 ntBASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms