Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 LINC00982-205ENST00000420957 435 ntBASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 AC109322.1-201ENST00000524499 1264 ntBASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 REXO1L3P-201ENST00000622202 1288 ntBASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 AL121761.2-201ENST00000598007 1648 ntBASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A3Q8N4M1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.46
SLC44A3Q8N4M1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 PAWRP1-201ENST00000451083 565 ntBASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 CXCL1P1-201ENST00000502804 216 ntBASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 AC138761.1-201ENST00000584393 385 ntBASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC44A3Q8N4M1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 AC005498.2-205ENST00000593218 784 ntBASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 AC022145.2-201ENST00000598203 171 ntBASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 AC009336.1-201ENST00000608941 1553 ntBASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 PI4KAP1-204ENST00000612579 1703 ntBASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC44A3Q8N4M1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms