Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA6Q8N139 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC25.86■■□□□ 1.73
ABCA6Q8N139 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC25.86■■□□□ 1.73
ABCA6Q8N139 LINC02560-201ENST00000596379 459 ntBASIC25.86■■□□□ 1.73
ABCA6Q8N139 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA6Q8N139 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC25.86■■□□□ 1.73
ABCA6Q8N139 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA6Q8N139 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
ABCA6Q8N139 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA6Q8N139 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA6Q8N139 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA6Q8N139 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC25.86■■□□□ 1.73
ABCA6Q8N139 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA6Q8N139 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA6Q8N139 CD81-202ENST00000381036 880 ntTSL 3 BASIC25.85■■□□□ 1.73
ABCA6Q8N139 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC25.85■■□□□ 1.73
ABCA6Q8N139 AC092580.3-201ENST00000430932 139 ntBASIC25.85■■□□□ 1.73
ABCA6Q8N139 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC25.85■■□□□ 1.73
ABCA6Q8N139 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA6Q8N139 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC25.85■■□□□ 1.73
ABCA6Q8N139 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA6Q8N139 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA6Q8N139 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA6Q8N139 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC25.85■■□□□ 1.73
ABCA6Q8N139 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA6Q8N139 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA6Q8N139 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA6Q8N139 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA6Q8N139 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC25.85■■□□□ 1.73
ABCA6Q8N139 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA6Q8N139 MYCLP1-201ENST00000372451 1075 ntBASIC25.85■■□□□ 1.73
ABCA6Q8N139 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC25.85■■□□□ 1.73
ABCA6Q8N139 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA6Q8N139 DUX4L17-201ENST00000557360 1267 ntBASIC25.85■■□□□ 1.73
ABCA6Q8N139 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC25.85■■□□□ 1.73
ABCA6Q8N139 RAB34-224ENST00000636513 888 ntTSL 5 BASIC25.85■■□□□ 1.73
ABCA6Q8N139 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
ABCA6Q8N139 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ABCA6Q8N139 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ABCA6Q8N139 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC25.84■■□□□ 1.73
ABCA6Q8N139 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ABCA6Q8N139 GK-202ENST00000378941 458 ntTSL 3 BASIC25.84■■□□□ 1.73
ABCA6Q8N139 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ABCA6Q8N139 MRPS18AP1-201ENST00000414458 589 ntBASIC25.84■■□□□ 1.73
ABCA6Q8N139 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ABCA6Q8N139 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC25.83■■□□□ 1.73
ABCA6Q8N139 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC25.83■■□□□ 1.73
ABCA6Q8N139 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
ABCA6Q8N139 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC25.83■■□□□ 1.73
ABCA6Q8N139 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ABCA6Q8N139 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC25.83■■□□□ 1.73
ABCA6Q8N139 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
ABCA6Q8N139 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC25.83■■□□□ 1.73
ABCA6Q8N139 FAM86C2P-203ENST00000528684 1004 ntBASIC25.83■■□□□ 1.73
ABCA6Q8N139 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.73
ABCA6Q8N139 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ABCA6Q8N139 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
ABCA6Q8N139 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.72
ABCA6Q8N139 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
ABCA6Q8N139 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ABCA6Q8N139 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
ABCA6Q8N139 SPCS2P4-201ENST00000436160 681 ntBASIC25.82■■□□□ 1.72
ABCA6Q8N139 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC25.82■■□□□ 1.72
ABCA6Q8N139 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
ABCA6Q8N139 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC25.82■■□□□ 1.72
ABCA6Q8N139 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC25.82■■□□□ 1.72
ABCA6Q8N139 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ABCA6Q8N139 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ABCA6Q8N139 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ABCA6Q8N139 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
ABCA6Q8N139 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ABCA6Q8N139 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ABCA6Q8N139 ENSA-206ENST00000361631 725 ntTSL 2 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 PPP6R2P1-201ENST00000450880 1275 ntBASIC25.81■■□□□ 1.72
ABCA6Q8N139 NAA50-208ENST00000497255 789 ntTSL 5 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ABCA6Q8N139 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ABCA6Q8N139 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ABCA6Q8N139 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ABCA6Q8N139 AKAP8P1-201ENST00000434743 1349 ntBASIC25.81■■□□□ 1.72
ABCA6Q8N139 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ABCA6Q8N139 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC25.81■■□□□ 1.72
ABCA6Q8N139 SPDYE22P-201ENST00000582158 798 ntBASIC25.81■■□□□ 1.72
ABCA6Q8N139 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
ABCA6Q8N139 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC25.8■■□□□ 1.72
ABCA6Q8N139 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms