Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC60Q8IWA6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC60Q8IWA6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.57■□□□□ 0.72
CCDC60Q8IWA6 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC60Q8IWA6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.57■□□□□ 0.72
CCDC60Q8IWA6 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC60Q8IWA6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC60Q8IWA6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC60Q8IWA6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC60Q8IWA6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC60Q8IWA6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC60Q8IWA6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CCDC60Q8IWA6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC60Q8IWA6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC60Q8IWA6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC60Q8IWA6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC60Q8IWA6 AC138932.1-201ENST00000534164 6830 ntBASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 AC073621.1-201ENST00000392730 636 ntBASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 SIGLEC30P-201ENST00000455569 941 ntBASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 AC117500.6-201ENST00000624871 588 ntBASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 AC006116.8-202ENST00000587620 1550 ntBASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC60Q8IWA6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 AC145285.3-201ENST00000564603 959 ntBASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 AC104109.2-201ENST00000602919 1418 ntBASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 AL589182.2-201ENST00000619332 1049 ntBASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC60Q8IWA6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 RNA5SP415-201ENST00000517246 115 ntBASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 AC006557.2-201ENST00000592985 1240 ntBASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC60Q8IWA6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms