Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 AC133963.1-201ENST00000504166 1679 ntBASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 RASA4DP-201ENST00000460726 1199 ntBASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 AC113404.2-201ENST00000507884 177 ntBASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 AL023806.1-201ENST00000603994 1649 ntBASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC50Q8IVM0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 AC018695.7-201ENST00000624587 2492 ntBASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 AC010203.1-204ENST00000548782 407 ntBASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 AL136038.4-201ENST00000603606 1261 ntBASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC50Q8IVM0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CCDC50Q8IVM0 AC080080.1-201ENST00000625121 2420 ntBASIC18.64■□□□□ 0.58
CCDC50Q8IVM0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC50Q8IVM0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 FER1L4-210ENST00000615531 5998 ntBASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC50Q8IVM0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC50Q8IVM0 AL118508.1-201ENST00000613502 2345 ntBASIC18.63■□□□□ 0.57
CCDC50Q8IVM0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC50Q8IVM0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC50Q8IVM0 AL391807.1-203ENST00000604392 2365 ntBASIC18.63■□□□□ 0.57
CCDC50Q8IVM0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC50Q8IVM0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC50Q8IVM0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC50Q8IVM0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms