Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 SNCG-201ENST00000348795 684 ntTSL 2 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 TERF1P3-201ENST00000505638 1227 ntBASIC12.16□□□□□ -0.46
CSMD3Q7Z407 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 REXO1L3P-201ENST00000622202 1288 ntBASIC12.16□□□□□ -0.46
CSMD3Q7Z407 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CSMD3Q7Z407 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 MIR943-201ENST00000401286 94 ntBASIC12.15□□□□□ -0.46
CSMD3Q7Z407 TFAMP1-201ENST00000412727 736 ntBASIC12.15□□□□□ -0.46
CSMD3Q7Z407 KRT18P32-201ENST00000424695 1287 ntBASIC12.15□□□□□ -0.46
CSMD3Q7Z407 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.15□□□□□ -0.46
CSMD3Q7Z407 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 AC104581.1-202ENST00000635932 2618 ntBASIC12.15□□□□□ -0.46
CSMD3Q7Z407 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.15□□□□□ -0.46
CSMD3Q7Z407 FAM86GP-201ENST00000448322 971 ntBASIC12.15□□□□□ -0.46
CSMD3Q7Z407 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 AL135744.1-201ENST00000565098 629 ntBASIC12.15□□□□□ -0.46
CSMD3Q7Z407 SPDYE22P-201ENST00000582158 798 ntBASIC12.15□□□□□ -0.46
CSMD3Q7Z407 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 CNN2P2-201ENST00000443536 909 ntBASIC12.15□□□□□ -0.46
CSMD3Q7Z407 CNN2P3-201ENST00000450201 906 ntBASIC12.15□□□□□ -0.46
CSMD3Q7Z407 KLF2P3-201ENST00000451977 1087 ntBASIC12.15□□□□□ -0.46
CSMD3Q7Z407 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 LINC01225-203ENST00000563550 1244 ntBASIC12.15□□□□□ -0.46
CSMD3Q7Z407 AL136317.3-201ENST00000618497 906 ntBASIC12.15□□□□□ -0.46
CSMD3Q7Z407 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD3Q7Z407 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.47
CSMD3Q7Z407 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CSMD3Q7Z407 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.15□□□□□ -0.47
CSMD3Q7Z407 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
CSMD3Q7Z407 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
CSMD3Q7Z407 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.15□□□□□ -0.47
CSMD3Q7Z407 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD3Q7Z407 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC12.14□□□□□ -0.47
CSMD3Q7Z407 SPDYE11-202ENST00000450699 704 ntBASIC12.14□□□□□ -0.47
CSMD3Q7Z407 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.14□□□□□ -0.47
CSMD3Q7Z407 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.14□□□□□ -0.47
CSMD3Q7Z407 SPDYE9P-201ENST00000570642 692 ntBASIC12.14□□□□□ -0.47
CSMD3Q7Z407 SPDYE10P-202ENST00000612005 668 ntBASIC12.14□□□□□ -0.47
CSMD3Q7Z407 SPDYE8P-202ENST00000612377 668 ntBASIC12.14□□□□□ -0.47
CSMD3Q7Z407 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD3Q7Z407 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms