Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.92□□□□□ -0.181e-6■□□□□ 10
LARP4Q71RC2 GUK1-217ENST00000465025 783 ntTSL 213.63□□□□□ -0.231e-6■□□□□ 10
LARP4Q71RC2 GUK1-232ENST00000486668 738 ntTSL 311.94□□□□□ -0.51e-6■□□□□ 10
LARP4Q71RC2 GUK1-212ENST00000435153 865 ntTSL 311.32□□□□□ -0.61e-6■□□□□ 10
LARP4Q71RC2 PCK2-204ENST00000557969 525 ntTSL 214.98□□□□□ -0.014e-14■□□□□ 10
LARP4Q71RC2 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.574e-16■□□□□ 10
LARP4Q71RC2 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC10.64□□□□□ -0.714e-16■□□□□ 10
LARP4Q71RC2 RPL38-201ENST00000311111 1170 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.94e-16■□□□□ 10
LARP4Q71RC2 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.25□□□□□ -1.734e-16■□□□□ 10
LARP4Q71RC2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.18■□□□□ 0.342e-11■□□□□ 10
LARP4Q71RC2 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.252e-11■□□□□ 10
LARP4Q71RC2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.827e-44■□□□□ 10
LARP4Q71RC2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.647e-44■□□□□ 10
LARP4Q71RC2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.13■□□□□ 0.177e-44■□□□□ 10
LARP4Q71RC2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.157e-44■□□□□ 10
LARP4Q71RC2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.011e-43■□□□□ 10
LARP4Q71RC2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.027e-44■□□□□ 10
LARP4Q71RC2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.91□□□□□ -0.027e-44■□□□□ 10
LARP4Q71RC2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.067e-44■□□□□ 10
LARP4Q71RC2 ALDOA-215ENST00000565355 538 ntTSL 514.2□□□□□ -0.147e-44■□□□□ 10
LARP4Q71RC2 ALDOA-211ENST00000564521 2534 ntTSL 513.34□□□□□ -0.277e-44■□□□□ 10
LARP4Q71RC2 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.287e-44■□□□□ 10
LARP4Q71RC2 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.297e-44■□□□□ 10
LARP4Q71RC2 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC13.21□□□□□ -0.37e-44■□□□□ 10
LARP4Q71RC2 ALDOA-217ENST00000566130 801 ntTSL 212.8□□□□□ -0.367e-44■□□□□ 10
LARP4Q71RC2 CES1-208ENST00000566555 659 ntTSL 319.5■□□□□ 0.712e-6■□□□□ 10
LARP4Q71RC2 TMEM86B-202ENST00000585416 2034 nt19.27■□□□□ 0.672e-6■□□□□ 10
LARP4Q71RC2 TMEM86B-203ENST00000589190 1508 ntTSL 218.84■□□□□ 0.612e-6■□□□□ 10
LARP4Q71RC2 CES1-206ENST00000565403 540 ntTSL 516.52■□□□□ 0.242e-6■□□□□ 10
LARP4Q71RC2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.022e-6■□□□□ 10
LARP4Q71RC2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.072e-6■□□□□ 10
LARP4Q71RC2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.098e-19■□□□□ 10
LARP4Q71RC2 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.242e-6■□□□□ 10
LARP4Q71RC2 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.252e-6■□□□□ 10
LARP4Q71RC2 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.432e-6■□□□□ 10
LARP4Q71RC2 CES1-204ENST00000563005 1002 ntTSL 512.03□□□□□ -0.482e-6■□□□□ 10
LARP4Q71RC2 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC9.5□□□□□ -0.892e-6■□□□□ 10
LARP4Q71RC2 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.982e-6■□□□□ 10
LARP4Q71RC2 LEAP2-203ENST00000485457 457 ntTSL 28.87□□□□□ -0.992e-6■□□□□ 10
LARP4Q71RC2 LEAP2-202ENST00000483190 935 ntTSL 1 (best)8.28□□□□□ -1.082e-6■□□□□ 10
LARP4Q71RC2 LEAP2-201ENST00000296877 2207 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.142e-6■□□□□ 10
LARP4Q71RC2 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.22e-6■□□□□ 10
LARP4Q71RC2 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.38□□□□□ -1.232e-6■□□□□ 10
LARP4Q71RC2 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.492e-6■□□□□ 10
LARP4Q71RC2 AL049779.1-203ENST00000554493 364 ntTSL 25.18□□□□□ -1.582e-6■□□□□ 10
LARP4Q71RC2 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.64□□□□□ -1.672e-6■□□□□ 10
LARP4Q71RC2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.692e-6■□□□□ 10
LARP4Q71RC2 AL049779.1-202ENST00000553582 498 ntTSL 24.1□□□□□ -1.752e-6■□□□□ 10
LARP4Q71RC2 AL049779.1-204ENST00000557564 274 ntAPPRIS P1 TSL 2-1.35□□□□□ -2.632e-6■□□□□ 10
LARP4Q71RC2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.94■■□□□ 1.265e-7■□□□□ 10
LARP4Q71RC2 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.225e-7■□□□□ 10
LARP4Q71RC2 MRPS7-207ENST00000584678 692 ntTSL 510.94□□□□□ -0.665e-7■□□□□ 10
LARP4Q71RC2 MRPS7-205ENST00000581993 731 ntTSL 29.95□□□□□ -0.825e-7■□□□□ 10
LARP4Q71RC2 SELENOP-214ENST00000514985 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.632e-19■□□□□ 10
LARP4Q71RC2 SELENOP-210ENST00000512980 4175 ntTSL 26.95□□□□□ -1.32e-19■□□□□ 10
LARP4Q71RC2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.434e-9■□□□□ 10
LARP4Q71RC2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.4■□□□□ 0.384e-17■□□□□ 10
LARP4Q71RC2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.14e-17■□□□□ 10
LARP4Q71RC2 SLCO4A1-207ENST00000495889 543 ntTSL 315.19■□□□□ 0.024e-9■□□□□ 10
LARP4Q71RC2 RBCK1-214ENST00000621487 473 ntTSL 214.7□□□□□ -0.064e-9■□□□□ 10
LARP4Q71RC2 SLCO4A1-205ENST00000466961 819 ntTSL 313.08□□□□□ -0.324e-9■□□□□ 10
LARP4Q71RC2 SLCO4A1-203ENST00000451793 856 ntTSL 212.43□□□□□ -0.424e-9■□□□□ 10
LARP4Q71RC2 SLCO4A1-204ENST00000466818 556 ntTSL 38.26□□□□□ -1.094e-9■□□□□ 10
LARP4Q71RC2 RAD23B-205ENST00000457811 811 ntTSL 37.07□□□□□ -1.284e-17■□□□□ 10
LARP4Q71RC2 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.72□□□□□ -1.494e-17■□□□□ 10
LARP4Q71RC2 RPL34-206ENST00000504231 629 ntTSL 1 (best)6.98□□□□□ -1.298e-23■□□□□ 9.9
LARP4Q71RC2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.236e-7■□□□□ 9.9
LARP4Q71RC2 F7-206ENST00000541084 2873 ntTSL 2 BASIC11.71□□□□□ -0.546e-7■□□□□ 9.9
LARP4Q71RC2 F7-202ENST00000375581 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.626e-7■□□□□ 9.9
LARP4Q71RC2 RPL10A-204ENST00000478340 962 ntTSL 216.58■□□□□ 0.243e-10■□□□□ 9.9
LARP4Q71RC2 RPL10A-203ENST00000467020 1069 ntTSL 313.96□□□□□ -0.173e-10■□□□□ 9.9
LARP4Q71RC2 RPL10A-202ENST00000464112 1063 ntTSL 1 (best)11.75□□□□□ -0.533e-10■□□□□ 9.9
LARP4Q71RC2 RPL10A-201ENST00000322203 716 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.693e-10■□□□□ 9.9
LARP4Q71RC2 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.821e-8■□□□□ 9.9
LARP4Q71RC2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.443e-12■□□□□ 9.9
LARP4Q71RC2 RANBP1-205ENST00000418705 932 ntTSL 315.11■□□□□ 0.018e-7■□□□□ 9.9
LARP4Q71RC2 TNFRSF1A-205ENST00000534885 2069 ntTSL 1 (best)19.74■□□□□ 0.757e-7■□□□□ 9.9
LARP4Q71RC2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.677e-7■□□□□ 9.9
LARP4Q71RC2 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.451e-323■□□□□ 9.9
LARP4Q71RC2 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.17□□□□□ -1.581e-323■□□□□ 9.9
LARP4Q71RC2 AFP-204ENST00000508838 728 ntTSL 24.85□□□□□ -1.631e-323■□□□□ 9.9
LARP4Q71RC2 AFP-203ENST00000506820 476 ntTSL 24.81□□□□□ -1.641e-323■□□□□ 9.9
LARP4Q71RC2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.725e-7■□□□□ 9.9
LARP4Q71RC2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.48□□□□□ -0.095e-7■□□□□ 9.9
LARP4Q71RC2 RHOA-203ENST00000422781 961 ntTSL 2 BASIC9.74□□□□□ -0.855e-7■□□□□ 9.9
LARP4Q71RC2 NDUFA3-207ENST00000420296 339 ntTSL 38.48□□□□□ -1.051e-8■□□□□ 9.9
LARP4Q71RC2 AL662899.3-203ENST00000409691 1903 ntTSL 314.12□□□□□ -0.153e-8■□□□□ 9.9
LARP4Q71RC2 ETFB-204ENST00000594361 2843 nt12.13□□□□□ -0.471e-21■□□□□ 9.9
LARP4Q71RC2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.68■□□□□ 0.588e-8■□□□□ 9.9
LARP4Q71RC2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.2■□□□□ 0.58e-8■□□□□ 9.9
LARP4Q71RC2 ESPN-214ENST00000633239 1494 ntTSL 517.52■□□□□ 0.48e-8■□□□□ 9.9
LARP4Q71RC2 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.158e-8■□□□□ 9.9
LARP4Q71RC2 ESPN-204ENST00000434576 750 ntTSL 313.18□□□□□ -0.38e-8■□□□□ 9.9
LARP4Q71RC2 ESPN-209ENST00000477679 885 ntTSL 212.85□□□□□ -0.358e-8■□□□□ 9.9
LARP4Q71RC2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.685e-9■□□□□ 9.9
LARP4Q71RC2 ACIN1-221ENST00000557432 642 ntTSL 311.29□□□□□ -0.65e-9■□□□□ 9.9
LARP4Q71RC2 ACIN1-217ENST00000555566 734 ntTSL 311.27□□□□□ -0.615e-9■□□□□ 9.9
LARP4Q71RC2 ACIN1-208ENST00000553721 610 ntTSL 39.19□□□□□ -0.945e-9■□□□□ 9.9
LARP4Q71RC2 ACIN1-214ENST00000555352 579 ntTSL 48.73□□□□□ -1.015e-9■□□□□ 9.9
LARP4Q71RC2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.572e-8■□□□□ 9.9
Retrieved 100 of 15,922 protein–RNA pairs in 313.1 ms