Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTR9Q6PD62 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CTR9Q6PD62 SPDYE21P-201ENST00000413323 827 ntBASIC20.93■□□□□ 0.94
CTR9Q6PD62 AL031284.1-201ENST00000419297 478 ntBASIC20.93■□□□□ 0.94
CTR9Q6PD62 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CTR9Q6PD62 BX005266.1-201ENST00000473402 457 ntBASIC20.93■□□□□ 0.94
CTR9Q6PD62 AC073648.2-201ENST00000510116 352 ntBASIC20.93■□□□□ 0.94
CTR9Q6PD62 AC079776.4-201ENST00000511039 504 ntBASIC20.93■□□□□ 0.94
CTR9Q6PD62 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.93■□□□□ 0.94
CTR9Q6PD62 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.93■□□□□ 0.94
CTR9Q6PD62 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
CTR9Q6PD62 AL049840.3-201ENST00000602669 611 ntBASIC20.93■□□□□ 0.94
CTR9Q6PD62 AC025062.2-201ENST00000605477 670 ntBASIC20.93■□□□□ 0.94
CTR9Q6PD62 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTR9Q6PD62 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CTR9Q6PD62 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CTR9Q6PD62 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTR9Q6PD62 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTR9Q6PD62 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CTR9Q6PD62 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.93■□□□□ 0.94
CTR9Q6PD62 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.93■□□□□ 0.94
CTR9Q6PD62 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTR9Q6PD62 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CTR9Q6PD62 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTR9Q6PD62 REXO1L11P-201ENST00000620964 1927 ntBASIC20.92■□□□□ 0.94
CTR9Q6PD62 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.92■□□□□ 0.94
CTR9Q6PD62 AC090340.1-201ENST00000620778 4980 ntBASIC20.92■□□□□ 0.94
CTR9Q6PD62 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTR9Q6PD62 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.92■□□□□ 0.94
CTR9Q6PD62 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTR9Q6PD62 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTR9Q6PD62 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CTR9Q6PD62 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.92■□□□□ 0.94
CTR9Q6PD62 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.92■□□□□ 0.94
CTR9Q6PD62 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CTR9Q6PD62 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CTR9Q6PD62 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.92■□□□□ 0.94
CTR9Q6PD62 AP001005.1-201ENST00000571755 1248 ntBASIC20.92■□□□□ 0.94
CTR9Q6PD62 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CTR9Q6PD62 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.92■□□□□ 0.94
CTR9Q6PD62 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTR9Q6PD62 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
CTR9Q6PD62 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTR9Q6PD62 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTR9Q6PD62 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.92■□□□□ 0.94
CTR9Q6PD62 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTR9Q6PD62 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTR9Q6PD62 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.92■□□□□ 0.94
CTR9Q6PD62 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTR9Q6PD62 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTR9Q6PD62 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.91■□□□□ 0.94
CTR9Q6PD62 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTR9Q6PD62 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CTR9Q6PD62 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTR9Q6PD62 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTR9Q6PD62 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTR9Q6PD62 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTR9Q6PD62 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.91■□□□□ 0.94
CTR9Q6PD62 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTR9Q6PD62 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.91■□□□□ 0.94
CTR9Q6PD62 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTR9Q6PD62 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.91■□□□□ 0.94
CTR9Q6PD62 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTR9Q6PD62 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CTR9Q6PD62 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTR9Q6PD62 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
CTR9Q6PD62 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTR9Q6PD62 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTR9Q6PD62 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CTR9Q6PD62 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.91■□□□□ 0.94
CTR9Q6PD62 SIGLEC16-201ENST00000599858 1437 ntBASIC20.91■□□□□ 0.94
CTR9Q6PD62 MTDHP4-201ENST00000600287 670 ntBASIC20.91■□□□□ 0.94
CTR9Q6PD62 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.91■□□□□ 0.94
CTR9Q6PD62 FAM215A-202ENST00000632077 792 ntBASIC20.91■□□□□ 0.94
CTR9Q6PD62 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTR9Q6PD62 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTR9Q6PD62 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTR9Q6PD62 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTR9Q6PD62 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTR9Q6PD62 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTR9Q6PD62 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 AC006116.8-202ENST00000587620 1550 ntBASIC20.9■□□□□ 0.94
CTR9Q6PD62 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTR9Q6PD62 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTR9Q6PD62 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTR9Q6PD62 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTR9Q6PD62 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTR9Q6PD62 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTR9Q6PD62 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms