Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.96■□□□□ 0.31
RIF1Q5UIP0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RIF1Q5UIP0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIF1Q5UIP0 HAUS4P1-201ENST00000406739 1145 ntBASIC16.96■□□□□ 0.31
RIF1Q5UIP0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.96■□□□□ 0.31
RIF1Q5UIP0 AP000842.3-202ENST00000569238 1080 ntBASIC16.96■□□□□ 0.31
RIF1Q5UIP0 AC099568.2-201ENST00000609194 695 ntBASIC16.96■□□□□ 0.31
RIF1Q5UIP0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.96■□□□□ 0.31
RIF1Q5UIP0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIF1Q5UIP0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.96■□□□□ 0.31
RIF1Q5UIP0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.96■□□□□ 0.31
RIF1Q5UIP0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RIF1Q5UIP0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIF1Q5UIP0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RIF1Q5UIP0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 MIR6080-201ENST00000617359 66 ntBASIC16.95■□□□□ 0.3
RIF1Q5UIP0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RIF1Q5UIP0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 AC112492.5-201ENST00000421897 457 ntBASIC16.94■□□□□ 0.3
RIF1Q5UIP0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 MIR4453-201ENST00000584019 89 ntBASIC16.94■□□□□ 0.3
RIF1Q5UIP0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 AL391825.1-201ENST00000457671 1364 ntBASIC16.94■□□□□ 0.3
RIF1Q5UIP0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.94■□□□□ 0.3
RIF1Q5UIP0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 RARRES2P8-201ENST00000566335 367 ntBASIC16.94■□□□□ 0.3
RIF1Q5UIP0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.94■□□□□ 0.3
RIF1Q5UIP0 AC007952.6-201ENST00000573168 2673 ntBASIC16.93■□□□□ 0.3
RIF1Q5UIP0 AC003957.1-201ENST00000625108 2673 ntBASIC16.93■□□□□ 0.3
RIF1Q5UIP0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 AC129492.6-201ENST00000611383 1305 ntBASIC16.93■□□□□ 0.3
RIF1Q5UIP0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms