Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.68■□□□□ 0.26
RUNDC3AQ59EK9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 AC034232.1-201ENST00000506026 1064 ntBASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 AC004263.2-201ENST00000617183 678 ntBASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 AC079602.3-201ENST00000623931 403 ntBASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RUNDC3AQ59EK9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 AL391807.1-203ENST00000604392 2365 ntBASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 AC141257.4-201ENST00000634557 245 ntBASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 AC136944.6-201ENST00000634818 245 ntBASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.66■□□□□ 0.26
RUNDC3AQ59EK9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RUNDC3AQ59EK9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms