Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.2■□□□□ 0.34
YBX1P67809 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
YBX1P67809 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
YBX1P67809 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.2■□□□□ 0.34
YBX1P67809 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.2■□□□□ 0.34
YBX1P67809 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.2■□□□□ 0.34
YBX1P67809 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.2■□□□□ 0.34
YBX1P67809 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YBX1P67809 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
YBX1P67809 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YBX1P67809 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.19■□□□□ 0.34
YBX1P67809 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
YBX1P67809 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.19■□□□□ 0.34
YBX1P67809 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YBX1P67809 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YBX1P67809 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
YBX1P67809 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YBX1P67809 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YBX1P67809 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YBX1P67809 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YBX1P67809 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YBX1P67809 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YBX1P67809 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YBX1P67809 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
YBX1P67809 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YBX1P67809 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.19■□□□□ 0.34
YBX1P67809 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.19■□□□□ 0.34
YBX1P67809 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
YBX1P67809 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.19■□□□□ 0.34
YBX1P67809 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.19■□□□□ 0.34
YBX1P67809 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.19■□□□□ 0.34
YBX1P67809 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
YBX1P67809 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.19■□□□□ 0.34
YBX1P67809 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
YBX1P67809 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.19■□□□□ 0.34
YBX1P67809 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.19■□□□□ 0.34
YBX1P67809 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.19■□□□□ 0.34
YBX1P67809 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
YBX1P67809 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YBX1P67809 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
YBX1P67809 AC010460.3-201ENST00000511359 1579 ntBASIC17.19■□□□□ 0.34
YBX1P67809 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
YBX1P67809 AC022898.2-201ENST00000616822 1312 ntBASIC17.19■□□□□ 0.34
YBX1P67809 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
YBX1P67809 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YBX1P67809 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YBX1P67809 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
YBX1P67809 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
YBX1P67809 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
YBX1P67809 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
YBX1P67809 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
YBX1P67809 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
YBX1P67809 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.18■□□□□ 0.34
YBX1P67809 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.18■□□□□ 0.34
YBX1P67809 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YBX1P67809 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YBX1P67809 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
YBX1P67809 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
YBX1P67809 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YBX1P67809 NSUN5P1-202ENST00000421140 1535 ntBASIC17.18■□□□□ 0.34
YBX1P67809 NSUN5P2-203ENST00000457352 1529 ntBASIC17.18■□□□□ 0.34
YBX1P67809 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YBX1P67809 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YBX1P67809 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
YBX1P67809 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YBX1P67809 KRT18P56-201ENST00000507275 550 ntBASIC17.18■□□□□ 0.34
YBX1P67809 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.18■□□□□ 0.34
YBX1P67809 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.18■□□□□ 0.34
YBX1P67809 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.18■□□□□ 0.34
YBX1P67809 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.18■□□□□ 0.34
YBX1P67809 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.18■□□□□ 0.34
YBX1P67809 AL138831.2-201ENST00000606564 490 ntBASIC17.18■□□□□ 0.34
YBX1P67809 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
YBX1P67809 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YBX1P67809 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YBX1P67809 AC125634.1-201ENST00000438758 1403 ntBASIC17.18■□□□□ 0.34
YBX1P67809 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.18■□□□□ 0.34
YBX1P67809 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
YBX1P67809 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YBX1P67809 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.18■□□□□ 0.34
YBX1P67809 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
YBX1P67809 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.18■□□□□ 0.34
YBX1P67809 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.18■□□□□ 0.34
YBX1P67809 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.18■□□□□ 0.34
YBX1P67809 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
YBX1P67809 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YBX1P67809 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YBX1P67809 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
YBX1P67809 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.17■□□□□ 0.34
YBX1P67809 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms