Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
AP3S2P59780 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
AP3S2P59780 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S2P59780 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S2P59780 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S2P59780 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.18■□□□□ 0.02
AP3S2P59780 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S2P59780 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S2P59780 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
AP3S2P59780 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
AP3S2P59780 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
AP3S2P59780 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
AP3S2P59780 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.17■□□□□ 0.02
AP3S2P59780 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.17■□□□□ 0.02
AP3S2P59780 AC008741.2-201ENST00000612792 3115 ntBASIC15.17■□□□□ 0.02
AP3S2P59780 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.17■□□□□ 0.02
AP3S2P59780 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
AP3S2P59780 PCDHB17P-201ENST00000539533 2393 ntBASIC15.17■□□□□ 0.02
AP3S2P59780 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.17■□□□□ 0.02
AP3S2P59780 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
AP3S2P59780 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.17■□□□□ 0.02
AP3S2P59780 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
AP3S2P59780 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.17■□□□□ 0.02
AP3S2P59780 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.17■□□□□ 0.02
AP3S2P59780 AC004911.1-201ENST00000416316 871 ntBASIC15.17■□□□□ 0.02
AP3S2P59780 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.17■□□□□ 0.02
AP3S2P59780 POM121L13P-201ENST00000422362 380 ntBASIC15.17■□□□□ 0.02
AP3S2P59780 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.17■□□□□ 0.02
AP3S2P59780 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.17■□□□□ 0.02
AP3S2P59780 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.17■□□□□ 0.02
AP3S2P59780 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.17■□□□□ 0.02
AP3S2P59780 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
AP3S2P59780 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
AP3S2P59780 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
AP3S2P59780 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.17■□□□□ 0.02
AP3S2P59780 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.17■□□□□ 0.02
AP3S2P59780 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
AP3S2P59780 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.17■□□□□ 0.02
AP3S2P59780 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.17■□□□□ 0.02
AP3S2P59780 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.17■□□□□ 0.02
AP3S2P59780 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S2P59780 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
AP3S2P59780 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
AP3S2P59780 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.17■□□□□ 0.02
AP3S2P59780 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.16■□□□□ 0.02
AP3S2P59780 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.16■□□□□ 0.02
AP3S2P59780 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
AP3S2P59780 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.16■□□□□ 0.02
AP3S2P59780 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
AP3S2P59780 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.16■□□□□ 0.02
AP3S2P59780 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.16■□□□□ 0.02
AP3S2P59780 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 MIR4758-201ENST00000577688 71 ntBASIC15.16■□□□□ 0.02
AP3S2P59780 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 MIR6821-201ENST00000617625 74 ntBASIC15.16■□□□□ 0.02
AP3S2P59780 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 MYC-209ENST00000641252 345 ntBASIC15.16■□□□□ 0.02
AP3S2P59780 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
AP3S2P59780 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
AP3S2P59780 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.16■□□□□ 0.02
AP3S2P59780 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
AP3S2P59780 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms