Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.53■■□□□ 1.04
PDE1AP54750 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE1AP54750 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.52■■□□□ 1.04
PDE1AP54750 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE1AP54750 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE1AP54750 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE1AP54750 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE1AP54750 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE1AP54750 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE1AP54750 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE1AP54750 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDE1AP54750 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.52■■□□□ 1.04
PDE1AP54750 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE1AP54750 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
PDE1AP54750 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.52■■□□□ 1.04
PDE1AP54750 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.52■■□□□ 1.04
PDE1AP54750 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PDE1AP54750 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE1AP54750 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDE1AP54750 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PDE1AP54750 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PDE1AP54750 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PDE1AP54750 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.52■■□□□ 1.04
PDE1AP54750 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDE1AP54750 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.52■■□□□ 1.03
PDE1AP54750 AC012313.1-201ENST00000593393 3059 ntBASIC21.52■■□□□ 1.03
PDE1AP54750 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE1AP54750 AC080080.1-201ENST00000625121 2420 ntBASIC21.51■■□□□ 1.03
PDE1AP54750 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.51■■□□□ 1.03
PDE1AP54750 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PDE1AP54750 AC106820.2-201ENST00000563775 3264 ntBASIC21.51■■□□□ 1.03
PDE1AP54750 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.51■■□□□ 1.03
PDE1AP54750 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE1AP54750 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE1AP54750 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE1AP54750 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE1AP54750 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE1AP54750 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
PDE1AP54750 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE1AP54750 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE1AP54750 AC103564.2-201ENST00000432853 1299 ntBASIC21.51■■□□□ 1.03
PDE1AP54750 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PDE1AP54750 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.51■■□□□ 1.03
PDE1AP54750 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.51■■□□□ 1.03
PDE1AP54750 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.51■■□□□ 1.03
PDE1AP54750 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.51■■□□□ 1.03
PDE1AP54750 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PDE1AP54750 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PDE1AP54750 AP001094.4-201ENST00000579008 2176 ntBASIC21.51■■□□□ 1.03
PDE1AP54750 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PDE1AP54750 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE1AP54750 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE1AP54750 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE1AP54750 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.5■■□□□ 1.03
PDE1AP54750 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PDE1AP54750 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.5■■□□□ 1.03
PDE1AP54750 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE1AP54750 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE1AP54750 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
PDE1AP54750 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE1AP54750 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
PDE1AP54750 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.5■■□□□ 1.03
PDE1AP54750 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDE1AP54750 AP000867.3-201ENST00000524675 377 ntBASIC21.5■■□□□ 1.03
PDE1AP54750 AC074051.2-201ENST00000565115 352 ntBASIC21.5■■□□□ 1.03
PDE1AP54750 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.5■■□□□ 1.03
PDE1AP54750 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.5■■□□□ 1.03
PDE1AP54750 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PDE1AP54750 INTS4P1-201ENST00000438455 1935 ntBASIC21.5■■□□□ 1.03
PDE1AP54750 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE1AP54750 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE1AP54750 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.5■■□□□ 1.03
PDE1AP54750 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PDE1AP54750 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE1AP54750 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE1AP54750 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PDE1AP54750 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.49■■□□□ 1.03
PDE1AP54750 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PDE1AP54750 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PDE1AP54750 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PDE1AP54750 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE1AP54750 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.49■■□□□ 1.03
PDE1AP54750 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDE1AP54750 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE1AP54750 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
PDE1AP54750 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PDE1AP54750 RCN1P2-201ENST00000398357 915 ntBASIC21.49■■□□□ 1.03
PDE1AP54750 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE1AP54750 MINOS1P3-201ENST00000457048 203 ntBASIC21.49■■□□□ 1.03
PDE1AP54750 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PDE1AP54750 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.49■■□□□ 1.03
PDE1AP54750 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.49■■□□□ 1.03
PDE1AP54750 AC092329.2-201ENST00000598402 547 ntBASIC21.49■■□□□ 1.03
PDE1AP54750 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.49■■□□□ 1.03
PDE1AP54750 AL353593.2-201ENST00000602529 1483 ntBASIC21.49■■□□□ 1.03
PDE1AP54750 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE1AP54750 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE1AP54750 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE1AP54750 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDE1AP54750 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms