Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
RNF144AP50876 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF144AP50876 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RNF144AP50876 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF144AP50876 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF144AP50876 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF144AP50876 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RNF144AP50876 AC141586.5-201ENST00000624546 2050 ntBASIC16.42■□□□□ 0.22
RNF144AP50876 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF144AP50876 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RNF144AP50876 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
RNF144AP50876 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF144AP50876 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF144AP50876 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF144AP50876 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RNF144AP50876 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF144AP50876 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF144AP50876 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RNF144AP50876 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF144AP50876 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF144AP50876 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF144AP50876 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF144AP50876 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF144AP50876 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF144AP50876 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RNF144AP50876 AL445228.2-201ENST00000605589 952 ntBASIC16.42■□□□□ 0.22
RNF144AP50876 AC010331.1-201ENST00000611423 582 ntBASIC16.42■□□□□ 0.22
RNF144AP50876 AC009154.2-201ENST00000621177 724 ntBASIC16.42■□□□□ 0.22
RNF144AP50876 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF144AP50876 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF144AP50876 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF144AP50876 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF144AP50876 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RNF144AP50876 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF144AP50876 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF144AP50876 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF144AP50876 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RNF144AP50876 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF144AP50876 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF144AP50876 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF144AP50876 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF144AP50876 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF144AP50876 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF144AP50876 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF144AP50876 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF144AP50876 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF144AP50876 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF144AP50876 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RNF144AP50876 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF144AP50876 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RNF144AP50876 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF144AP50876 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RNF144AP50876 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF144AP50876 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF144AP50876 MTCL1P1-201ENST00000446207 792 ntBASIC16.41■□□□□ 0.22
RNF144AP50876 AC068472.1-201ENST00000474589 881 ntBASIC16.41■□□□□ 0.22
RNF144AP50876 FAM86EP-206ENST00000510506 987 ntBASIC16.41■□□□□ 0.22
RNF144AP50876 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF144AP50876 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF144AP50876 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.41■□□□□ 0.22
RNF144AP50876 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF144AP50876 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
RNF144AP50876 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF144AP50876 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF144AP50876 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RNF144AP50876 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF144AP50876 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF144AP50876 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF144AP50876 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF144AP50876 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF144AP50876 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
RNF144AP50876 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF144AP50876 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF144AP50876 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF144AP50876 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF144AP50876 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF144AP50876 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF144AP50876 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RNF144AP50876 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF144AP50876 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF144AP50876 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RNF144AP50876 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
RNF144AP50876 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF144AP50876 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF144AP50876 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF144AP50876 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF144AP50876 ARMC10P1-201ENST00000313754 855 ntBASIC16.4■□□□□ 0.22
RNF144AP50876 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF144AP50876 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF144AP50876 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF144AP50876 MIR1224-201ENST00000408193 85 ntBASIC16.4■□□□□ 0.22
RNF144AP50876 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF144AP50876 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF144AP50876 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms