Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.37■■□□□ 1.01
COL11A2P13942 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A2P13942 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.37■■□□□ 1.01
COL11A2P13942 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A2P13942 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.37■■□□□ 1.01
COL11A2P13942 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A2P13942 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A2P13942 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A2P13942 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.36■■□□□ 1.01
COL11A2P13942 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.36■■□□□ 1.01
COL11A2P13942 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.36■■□□□ 1.01
COL11A2P13942 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A2P13942 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.36■■□□□ 1.01
COL11A2P13942 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
COL11A2P13942 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.36■■□□□ 1.01
COL11A2P13942 MEIS3P1-201ENST00000495167 958 ntBASIC21.36■■□□□ 1.01
COL11A2P13942 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.36■■□□□ 1.01
COL11A2P13942 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.36■■□□□ 1.01
COL11A2P13942 AL390754.1-201ENST00000619088 582 ntBASIC21.36■■□□□ 1.01
COL11A2P13942 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.36■■□□□ 1.01
COL11A2P13942 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A2P13942 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A2P13942 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A2P13942 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A2P13942 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A2P13942 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.36■■□□□ 1.01
COL11A2P13942 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A2P13942 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A2P13942 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.36■■□□□ 1.01
COL11A2P13942 AL135999.2-201ENST00000622438 1686 ntBASIC21.36■■□□□ 1.01
COL11A2P13942 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
COL11A2P13942 AC116407.2-201ENST00000613639 860 ntBASIC21.35■■□□□ 1.01
COL11A2P13942 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.35■■□□□ 1.01
COL11A2P13942 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
COL11A2P13942 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL11A2P13942 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.35■■□□□ 1.01
COL11A2P13942 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.35■■□□□ 1.01
COL11A2P13942 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
COL11A2P13942 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL11A2P13942 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
COL11A2P13942 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
COL11A2P13942 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL11A2P13942 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.35■■□□□ 1.01
COL11A2P13942 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
COL11A2P13942 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
COL11A2P13942 SPDYE14P-201ENST00000442619 822 ntBASIC21.35■■□□□ 1.01
COL11A2P13942 FAM185BP-201ENST00000443595 716 ntBASIC21.35■■□□□ 1.01
COL11A2P13942 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
COL11A2P13942 AC125807.1-201ENST00000483097 614 ntBASIC21.35■■□□□ 1.01
COL11A2P13942 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.35■■□□□ 1.01
COL11A2P13942 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.35■■□□□ 1.01
COL11A2P13942 RARRES2P8-201ENST00000566335 367 ntBASIC21.35■■□□□ 1.01
COL11A2P13942 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.34■■□□□ 1.01
COL11A2P13942 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A2P13942 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
COL11A2P13942 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.34■■□□□ 1.01
COL11A2P13942 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.34■■□□□ 1.01
COL11A2P13942 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A2P13942 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A2P13942 AC002056.1-201ENST00000395613 760 ntBASIC21.34■■□□□ 1.01
COL11A2P13942 TREML5P-201ENST00000421694 576 ntBASIC21.34■■□□□ 1.01
COL11A2P13942 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.34■■□□□ 1.01
COL11A2P13942 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.34■■□□□ 1.01
COL11A2P13942 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.34■■□□□ 1.01
COL11A2P13942 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.34■■□□□ 1.01
COL11A2P13942 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.34■■□□□ 1.01
COL11A2P13942 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.34■■□□□ 1.01
COL11A2P13942 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
COL11A2P13942 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A2P13942 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL11A2P13942 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL11A2P13942 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL11A2P13942 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
COL11A2P13942 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.33■■□□□ 1.01
COL11A2P13942 TFAMP1-201ENST00000412727 736 ntBASIC21.33■■□□□ 1.01
COL11A2P13942 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.33■■□□□ 1.01
COL11A2P13942 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.33■■□□□ 1.01
COL11A2P13942 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.33■■□□□ 1.01
COL11A2P13942 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL11A2P13942 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
COL11A2P13942 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
COL11A2P13942 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.33■■□□□ 1
COL11A2P13942 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.33■■□□□ 1
COL11A2P13942 REXO1L11P-201ENST00000620964 1927 ntBASIC21.33■■□□□ 1
COL11A2P13942 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.32■■□□□ 1
COL11A2P13942 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL11A2P13942 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.32■■□□□ 1
COL11A2P13942 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.32■■□□□ 1
COL11A2P13942 AC055876.3-201ENST00000431496 288 ntBASIC21.32■■□□□ 1
COL11A2P13942 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.32■■□□□ 1
COL11A2P13942 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.32■■□□□ 1
COL11A2P13942 AC243562.1-201ENST00000560672 389 ntBASIC21.32■■□□□ 1
COL11A2P13942 AC138649.4-201ENST00000612222 287 ntBASIC21.32■■□□□ 1
COL11A2P13942 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
COL11A2P13942 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.32■■□□□ 1
COL11A2P13942 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL11A2P13942 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL11A2P13942 AC129492.6-201ENST00000611383 1305 ntBASIC21.32■■□□□ 1
COL11A2P13942 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.32■■□□□ 1
COL11A2P13942 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms