Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM17P0DL12 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SMIM17P0DL12 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM17P0DL12 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.19□□□□□ -0.3
SMIM17P0DL12 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
SMIM17P0DL12 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SMIM17P0DL12 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SMIM17P0DL12 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.19□□□□□ -0.3
SMIM17P0DL12 MIR149-201ENST00000384879 89 ntBASIC13.19□□□□□ -0.3
SMIM17P0DL12 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.19□□□□□ -0.3
SMIM17P0DL12 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
SMIM17P0DL12 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.19□□□□□ -0.3
SMIM17P0DL12 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.19□□□□□ -0.3
SMIM17P0DL12 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SMIM17P0DL12 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM17P0DL12 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM17P0DL12 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 FSCN1P1-201ENST00000568912 1481 ntBASIC13.18□□□□□ -0.3
SMIM17P0DL12 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 AL023284.2-201ENST00000405850 579 ntBASIC13.18□□□□□ -0.3
SMIM17P0DL12 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 MIR6786-201ENST00000616843 113 ntBASIC13.18□□□□□ -0.3
SMIM17P0DL12 AC130371.2-201ENST00000619443 611 ntBASIC13.18□□□□□ -0.3
SMIM17P0DL12 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.18□□□□□ -0.3
SMIM17P0DL12 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 KRT8P50-201ENST00000562022 1438 ntBASIC13.18□□□□□ -0.3
SMIM17P0DL12 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SMIM17P0DL12 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM17P0DL12 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.17□□□□□ -0.3
SMIM17P0DL12 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms