Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.48■□□□□ 0.71
TPM1P09493 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TPM1P09493 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.48■□□□□ 0.71
TPM1P09493 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM1P09493 ITM2C-210ENST00000620962 501 ntBASIC19.48■□□□□ 0.71
TPM1P09493 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM1P09493 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TPM1P09493 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM1P09493 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TPM1P09493 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TPM1P09493 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
TPM1P09493 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM1P09493 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TPM1P09493 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TPM1P09493 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM1P09493 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM1P09493 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM1P09493 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TPM1P09493 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TPM1P09493 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM1P09493 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM1P09493 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.47■□□□□ 0.71
TPM1P09493 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM1P09493 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.47■□□□□ 0.71
TPM1P09493 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM1P09493 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM1P09493 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.47■□□□□ 0.71
TPM1P09493 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TPM1P09493 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TPM1P09493 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.47■□□□□ 0.71
TPM1P09493 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.47■□□□□ 0.71
TPM1P09493 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TPM1P09493 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
TPM1P09493 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM1P09493 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM1P09493 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM1P09493 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.47■□□□□ 0.71
TPM1P09493 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM1P09493 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM1P09493 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TPM1P09493 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TPM1P09493 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM1P09493 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TPM1P09493 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM1P09493 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TPM1P09493 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM1P09493 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM1P09493 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM1P09493 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM1P09493 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TPM1P09493 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM1P09493 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM1P09493 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM1P09493 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.46■□□□□ 0.71
TPM1P09493 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.46■□□□□ 0.71
TPM1P09493 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.46■□□□□ 0.71
TPM1P09493 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TPM1P09493 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TPM1P09493 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TPM1P09493 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
TPM1P09493 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM1P09493 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TPM1P09493 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM1P09493 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TPM1P09493 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TPM1P09493 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TPM1P09493 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
TPM1P09493 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM1P09493 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM1P09493 AP003071.4-201ENST00000562276 1284 ntBASIC19.45■□□□□ 0.7
TPM1P09493 C2orf69P3-201ENST00000565542 1120 ntBASIC19.45■□□□□ 0.7
TPM1P09493 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.45■□□□□ 0.7
TPM1P09493 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TPM1P09493 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM1P09493 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.45■□□□□ 0.7
TPM1P09493 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
TPM1P09493 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TPM1P09493 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TPM1P09493 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
TPM1P09493 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TPM1P09493 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM1P09493 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM1P09493 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
TPM1P09493 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM1P09493 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TPM1P09493 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM1P09493 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM1P09493 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TPM1P09493 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TPM1P09493 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
TPM1P09493 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.44■□□□□ 0.7
TPM1P09493 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.44■□□□□ 0.7
TPM1P09493 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM1P09493 LINC00167-201ENST00000530583 1419 ntBASIC19.44■□□□□ 0.7
TPM1P09493 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TPM1P09493 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM1P09493 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM1P09493 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.44■□□□□ 0.7
TPM1P09493 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.44■□□□□ 0.7
TPM1P09493 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms