Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 LINC00304-203ENST00000565008 1864 ntBASIC15.88■□□□□ 0.13
HLA-DPB1P04440 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 ECEL1P3-201ENST00000427961 737 ntBASIC15.88■□□□□ 0.13
HLA-DPB1P04440 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 SLC25A3P1-201ENST00000443844 931 ntBASIC15.88■□□□□ 0.13
HLA-DPB1P04440 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 AC012306.2-201ENST00000609350 630 ntBASIC15.88■□□□□ 0.13
HLA-DPB1P04440 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
HLA-DPB1P04440 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 AC097493.4-201ENST00000641197 219 ntBASIC15.87■□□□□ 0.13
HLA-DPB1P04440 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.87■□□□□ 0.13
HLA-DPB1P04440 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 AC106886.4-201ENST00000623557 2502 ntBASIC15.87■□□□□ 0.13
HLA-DPB1P04440 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPB1P04440 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPB1P04440 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms