Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PDGFBP01127 AC100803.2-201ENST00000562459 1963 ntBASIC17.61■□□□□ 0.41
PDGFBP01127 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFBP01127 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFBP01127 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFBP01127 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.61■□□□□ 0.41
PDGFBP01127 AC245100.3-201ENST00000441281 285 ntBASIC17.61■□□□□ 0.41
PDGFBP01127 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFBP01127 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.61■□□□□ 0.41
PDGFBP01127 SPDYE22P-201ENST00000582158 798 ntBASIC17.61■□□□□ 0.41
PDGFBP01127 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFBP01127 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.61■□□□□ 0.41
PDGFBP01127 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PDGFBP01127 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.61■□□□□ 0.41
PDGFBP01127 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFBP01127 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFBP01127 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFBP01127 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFBP01127 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFBP01127 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PDGFBP01127 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFBP01127 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PDGFBP01127 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFBP01127 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFBP01127 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFBP01127 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFBP01127 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.6■□□□□ 0.41
PDGFBP01127 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFBP01127 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFBP01127 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.6■□□□□ 0.41
PDGFBP01127 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PDGFBP01127 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFBP01127 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFBP01127 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFBP01127 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFBP01127 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFBP01127 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.6■□□□□ 0.41
PDGFBP01127 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.6■□□□□ 0.41
PDGFBP01127 AC027307.3-201ENST00000594262 1100 ntBASIC17.6■□□□□ 0.41
PDGFBP01127 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFBP01127 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PDGFBP01127 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.6■□□□□ 0.41
PDGFBP01127 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PDGFBP01127 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
PDGFBP01127 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.6■□□□□ 0.41
PDGFBP01127 AC009336.1-201ENST00000608941 1553 ntBASIC17.6■□□□□ 0.41
PDGFBP01127 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFBP01127 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFBP01127 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
PDGFBP01127 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFBP01127 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFBP01127 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.59■□□□□ 0.41
PDGFBP01127 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PDGFBP01127 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.59■□□□□ 0.41
PDGFBP01127 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.59■□□□□ 0.41
PDGFBP01127 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.59■□□□□ 0.41
PDGFBP01127 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PDGFBP01127 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.59■□□□□ 0.41
PDGFBP01127 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
PDGFBP01127 ARSEP1-201ENST00000420443 635 ntBASIC17.59■□□□□ 0.41
PDGFBP01127 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
PDGFBP01127 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.59■□□□□ 0.41
PDGFBP01127 AC097493.3-201ENST00000509725 367 ntBASIC17.59■□□□□ 0.41
PDGFBP01127 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.59■□□□□ 0.41
PDGFBP01127 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.59■□□□□ 0.41
PDGFBP01127 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.59■□□□□ 0.41
PDGFBP01127 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
PDGFBP01127 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
PDGFBP01127 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
PDGFBP01127 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDGFBP01127 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PDGFBP01127 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PDGFBP01127 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDGFBP01127 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
PDGFBP01127 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDGFBP01127 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDGFBP01127 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
PDGFBP01127 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PDGFBP01127 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PDGFBP01127 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.58■□□□□ 0.41
PDGFBP01127 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFBP01127 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFBP01127 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms