Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CLPXO76031 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.07■□□□□ 0.16
CLPXO76031 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPXO76031 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPXO76031 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPXO76031 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPXO76031 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.07■□□□□ 0.16
CLPXO76031 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPXO76031 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPXO76031 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CLPXO76031 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPXO76031 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPXO76031 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.06■□□□□ 0.16
CLPXO76031 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLPXO76031 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLPXO76031 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.06■□□□□ 0.16
CLPXO76031 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.06■□□□□ 0.16
CLPXO76031 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.06■□□□□ 0.16
CLPXO76031 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLPXO76031 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.06■□□□□ 0.16
CLPXO76031 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLPXO76031 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.06■□□□□ 0.16
CLPXO76031 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPXO76031 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPXO76031 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CLPXO76031 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLPXO76031 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.06■□□□□ 0.16
CLPXO76031 KRASP1-201ENST00000407852 552 ntBASIC16.06■□□□□ 0.16
CLPXO76031 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLPXO76031 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CLPXO76031 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.06■□□□□ 0.16
CLPXO76031 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLPXO76031 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CLPXO76031 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.06■□□□□ 0.16
CLPXO76031 AC004264.1-201ENST00000608354 794 ntBASIC16.06■□□□□ 0.16
CLPXO76031 AL023875.1-201ENST00000640777 796 ntBASIC16.06■□□□□ 0.16
CLPXO76031 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPXO76031 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CLPXO76031 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.06■□□□□ 0.16
CLPXO76031 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPXO76031 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLPXO76031 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPXO76031 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPXO76031 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CLPXO76031 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.05■□□□□ 0.16
CLPXO76031 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CLPXO76031 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.05■□□□□ 0.16
CLPXO76031 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CLPXO76031 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.05■□□□□ 0.16
CLPXO76031 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CLPXO76031 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CLPXO76031 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 KRT18P41-201ENST00000518924 1277 ntBASIC16.05■□□□□ 0.16
CLPXO76031 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CLPXO76031 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.05■□□□□ 0.16
CLPXO76031 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.05■□□□□ 0.16
CLPXO76031 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.05■□□□□ 0.16
CLPXO76031 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CLPXO76031 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CLPXO76031 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CLPXO76031 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CLPXO76031 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPXO76031 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.05■□□□□ 0.16
CLPXO76031 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CLPXO76031 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.04■□□□□ 0.16
CLPXO76031 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLPXO76031 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CLPXO76031 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLPXO76031 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLPXO76031 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.04■□□□□ 0.16
CLPXO76031 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CLPXO76031 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CLPXO76031 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLPXO76031 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CLPXO76031 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.04■□□□□ 0.16
CLPXO76031 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLPXO76031 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms