Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.19■□□□□ 0.5
TSPAN3O60637 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TSPAN3O60637 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.19■□□□□ 0.5
TSPAN3O60637 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.19■□□□□ 0.5
TSPAN3O60637 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TSPAN3O60637 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TSPAN3O60637 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TSPAN3O60637 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 AC103564.2-201ENST00000432853 1299 ntBASIC18.19■□□□□ 0.5
TSPAN3O60637 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.19■□□□□ 0.5
TSPAN3O60637 BX005266.1-201ENST00000473402 457 ntBASIC18.19■□□□□ 0.5
TSPAN3O60637 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.19■□□□□ 0.5
TSPAN3O60637 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
TSPAN3O60637 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.19■□□□□ 0.5
TSPAN3O60637 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.19■□□□□ 0.5
TSPAN3O60637 AC021087.4-201ENST00000563761 564 ntBASIC18.19■□□□□ 0.5
TSPAN3O60637 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.19■□□□□ 0.5
TSPAN3O60637 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.19■□□□□ 0.5
TSPAN3O60637 AC064862.7-201ENST00000604520 867 ntBASIC18.19■□□□□ 0.5
TSPAN3O60637 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.19■□□□□ 0.5
TSPAN3O60637 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.19■□□□□ 0.5
TSPAN3O60637 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TSPAN3O60637 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.19■□□□□ 0.5
TSPAN3O60637 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 AC004817.3-201ENST00000602957 2129 ntBASIC18.19■□□□□ 0.5
TSPAN3O60637 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN3O60637 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.18■□□□□ 0.5
TSPAN3O60637 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.18■□□□□ 0.5
TSPAN3O60637 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.18■□□□□ 0.5
TSPAN3O60637 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN3O60637 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN3O60637 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN3O60637 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.18■□□□□ 0.5
TSPAN3O60637 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN3O60637 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.18■□□□□ 0.5
TSPAN3O60637 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.18■□□□□ 0.5
TSPAN3O60637 AL031284.1-201ENST00000419297 478 ntBASIC18.18■□□□□ 0.5
TSPAN3O60637 HNRNPDP1-201ENST00000439535 754 ntBASIC18.18■□□□□ 0.5
TSPAN3O60637 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TSPAN3O60637 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN3O60637 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.18■□□□□ 0.5
TSPAN3O60637 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN3O60637 AP001005.1-201ENST00000571755 1248 ntBASIC18.18■□□□□ 0.5
TSPAN3O60637 AC109462.3-201ENST00000573934 613 ntBASIC18.18■□□□□ 0.5
TSPAN3O60637 AL049840.3-201ENST00000602669 611 ntBASIC18.18■□□□□ 0.5
TSPAN3O60637 AD001527.2-201ENST00000622994 785 ntBASIC18.18■□□□□ 0.5
TSPAN3O60637 AC073592.5-201ENST00000624854 528 ntBASIC18.18■□□□□ 0.5
TSPAN3O60637 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN3O60637 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.18■□□□□ 0.5
TSPAN3O60637 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.18■□□□□ 0.5
TSPAN3O60637 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN3O60637 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
TSPAN3O60637 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN3O60637 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TSPAN3O60637 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN3O60637 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN3O60637 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN3O60637 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN3O60637 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
TSPAN3O60637 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.18■□□□□ 0.5
TSPAN3O60637 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.17■□□□□ 0.5
TSPAN3O60637 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TSPAN3O60637 PMPCAP1-201ENST00000508114 1576 ntBASIC18.17■□□□□ 0.5
TSPAN3O60637 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TSPAN3O60637 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 DDX43P3-201ENST00000441064 443 ntBASIC18.17■□□□□ 0.5
TSPAN3O60637 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.17■□□□□ 0.5
TSPAN3O60637 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.17■□□□□ 0.5
TSPAN3O60637 RNA5SP419-201ENST00000515908 135 ntBASIC18.17■□□□□ 0.5
TSPAN3O60637 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.17■□□□□ 0.5
TSPAN3O60637 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.17■□□□□ 0.5
TSPAN3O60637 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.17■□□□□ 0.5
TSPAN3O60637 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TSPAN3O60637 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms