Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
GMDSO60547 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.67■□□□□ 0.1
GMDSO60547 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
GMDSO60547 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GMDSO60547 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GMDSO60547 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GMDSO60547 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GMDSO60547 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
GMDSO60547 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.66■□□□□ 0.1
GMDSO60547 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.66■□□□□ 0.1
GMDSO60547 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
GMDSO60547 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
GMDSO60547 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GMDSO60547 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
GMDSO60547 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.66■□□□□ 0.1
GMDSO60547 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GMDSO60547 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
GMDSO60547 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GMDSO60547 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GMDSO60547 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GMDSO60547 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
GMDSO60547 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
GMDSO60547 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
GMDSO60547 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
GMDSO60547 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GMDSO60547 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
GMDSO60547 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.66■□□□□ 0.1
GMDSO60547 GCSHP2-201ENST00000560971 527 ntBASIC15.66■□□□□ 0.1
GMDSO60547 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.66■□□□□ 0.1
GMDSO60547 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.66■□□□□ 0.1
GMDSO60547 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.66■□□□□ 0.1
GMDSO60547 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.66■□□□□ 0.1
GMDSO60547 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
GMDSO60547 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GMDSO60547 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GMDSO60547 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.66■□□□□ 0.1
GMDSO60547 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GMDSO60547 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GMDSO60547 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GMDSO60547 CROCCP1-201ENST00000426910 5675 ntBASIC15.66■□□□□ 0.1
GMDSO60547 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
GMDSO60547 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
GMDSO60547 AL024508.2-201ENST00000607749 1894 ntBASIC15.65■□□□□ 0.1
GMDSO60547 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 AC093010.1-201ENST00000473625 1624 ntBASIC15.65■□□□□ 0.1
GMDSO60547 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.65■□□□□ 0.1
GMDSO60547 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
GMDSO60547 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 PKD1P5-201ENST00000532415 10291 ntBASIC15.65■□□□□ 0.1
GMDSO60547 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.65■□□□□ 0.1
GMDSO60547 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.65■□□□□ 0.1
GMDSO60547 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.65■□□□□ 0.1
GMDSO60547 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.65■□□□□ 0.1
GMDSO60547 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.65■□□□□ 0.1
GMDSO60547 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.65■□□□□ 0.1
GMDSO60547 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.65■□□□□ 0.1
GMDSO60547 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.65■□□□□ 0.1
GMDSO60547 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.65■□□□□ 0.1
GMDSO60547 AC008687.5-201ENST00000593746 558 ntBASIC15.65■□□□□ 0.1
GMDSO60547 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
GMDSO60547 AL023973.1-201ENST00000624619 620 ntBASIC15.65■□□□□ 0.1
GMDSO60547 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
GMDSO60547 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.65■□□□□ 0.1
GMDSO60547 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.65■□□□□ 0.1
GMDSO60547 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
GMDSO60547 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GMDSO60547 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
GMDSO60547 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.65■□□□□ 0.1
GMDSO60547 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.65■□□□□ 0.1
GMDSO60547 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GMDSO60547 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GMDSO60547 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
GMDSO60547 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GMDSO60547 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
GMDSO60547 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GMDSO60547 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GMDSO60547 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
GMDSO60547 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms