Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PEX1O43933 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PEX1O43933 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
PEX1O43933 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PEX1O43933 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
PEX1O43933 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PEX1O43933 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.26■□□□□ 0.35
PEX1O43933 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.26■□□□□ 0.35
PEX1O43933 AL357033.4-201ENST00000617703 1807 ntBASIC17.26■□□□□ 0.35
PEX1O43933 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PEX1O43933 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PEX1O43933 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PEX1O43933 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PEX1O43933 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PEX1O43933 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.25■□□□□ 0.35
PEX1O43933 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PEX1O43933 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PEX1O43933 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PEX1O43933 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PEX1O43933 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PEX1O43933 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PEX1O43933 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.25■□□□□ 0.35
PEX1O43933 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PEX1O43933 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.25■□□□□ 0.35
PEX1O43933 AL138688.1-201ENST00000624851 1594 ntBASIC17.25■□□□□ 0.35
PEX1O43933 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PEX1O43933 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PEX1O43933 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
PEX1O43933 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PEX1O43933 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.25■□□□□ 0.35
PEX1O43933 HOMER2P1-201ENST00000455653 964 ntBASIC17.25■□□□□ 0.35
PEX1O43933 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.25■□□□□ 0.35
PEX1O43933 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.25■□□□□ 0.35
PEX1O43933 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.25■□□□□ 0.35
PEX1O43933 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.25■□□□□ 0.35
PEX1O43933 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PEX1O43933 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
PEX1O43933 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PEX1O43933 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PEX1O43933 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PEX1O43933 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
PEX1O43933 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.25■□□□□ 0.35
PEX1O43933 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.25■□□□□ 0.35
PEX1O43933 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PEX1O43933 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PEX1O43933 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.25■□□□□ 0.35
PEX1O43933 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
PEX1O43933 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PEX1O43933 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.24■□□□□ 0.35
PEX1O43933 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PEX1O43933 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PEX1O43933 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PEX1O43933 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PEX1O43933 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
PEX1O43933 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PEX1O43933 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.24■□□□□ 0.35
PEX1O43933 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.24■□□□□ 0.35
PEX1O43933 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PEX1O43933 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PEX1O43933 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
PEX1O43933 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PEX1O43933 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PEX1O43933 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.24■□□□□ 0.35
PEX1O43933 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PEX1O43933 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.24■□□□□ 0.35
PEX1O43933 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.24■□□□□ 0.35
PEX1O43933 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.24■□□□□ 0.35
PEX1O43933 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PEX1O43933 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.24■□□□□ 0.35
PEX1O43933 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.24■□□□□ 0.35
PEX1O43933 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.24■□□□□ 0.35
PEX1O43933 NEK4P2-201ENST00000580004 1012 ntBASIC17.24■□□□□ 0.35
PEX1O43933 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PEX1O43933 KRT18P55-202ENST00000578578 1546 ntBASIC17.24■□□□□ 0.35
PEX1O43933 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PEX1O43933 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.24■□□□□ 0.35
PEX1O43933 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.24■□□□□ 0.35
PEX1O43933 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.24■□□□□ 0.35
PEX1O43933 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
PEX1O43933 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PEX1O43933 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PEX1O43933 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PEX1O43933 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PEX1O43933 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PEX1O43933 MYLKP1-201ENST00000509077 1580 ntBASIC17.23■□□□□ 0.35
PEX1O43933 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.23■□□□□ 0.35
PEX1O43933 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PEX1O43933 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PEX1O43933 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 AC105020.1-201ENST00000435356 2205 ntBASIC17.23■□□□□ 0.35
PEX1O43933 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms