Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 FAM220BP-201ENST00000377689 816 ntBASIC24.13■■□□□ 1.45
MSH5O43196 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC24.13■■□□□ 1.45
MSH5O43196 AL353626.3-201ENST00000413399 657 ntBASIC24.13■■□□□ 1.45
MSH5O43196 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
MSH5O43196 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC24.13■■□□□ 1.45
MSH5O43196 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
MSH5O43196 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC24.13■■□□□ 1.45
MSH5O43196 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC24.13■■□□□ 1.45
MSH5O43196 ZNF736P8Y-201ENST00000451913 669 ntBASIC24.13■■□□□ 1.45
MSH5O43196 KRT16P4-201ENST00000453883 522 ntBASIC24.13■■□□□ 1.45
MSH5O43196 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
MSH5O43196 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC24.13■■□□□ 1.45
MSH5O43196 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 AC109635.3-201ENST00000529536 185 ntBASIC24.13■■□□□ 1.45
MSH5O43196 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC24.13■■□□□ 1.45
MSH5O43196 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC24.13■■□□□ 1.45
MSH5O43196 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC24.13■■□□□ 1.45
MSH5O43196 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC24.13■■□□□ 1.45
MSH5O43196 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC24.13■■□□□ 1.45
MSH5O43196 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
MSH5O43196 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC24.13■■□□□ 1.45
MSH5O43196 AF228730.7-201ENST00000641842 219 ntBASIC24.13■■□□□ 1.45
MSH5O43196 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
MSH5O43196 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC24.13■■□□□ 1.45
MSH5O43196 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC24.12■■□□□ 1.45
MSH5O43196 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
MSH5O43196 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
MSH5O43196 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
MSH5O43196 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC24.12■■□□□ 1.45
MSH5O43196 GPAT2P1-201ENST00000444924 1672 ntBASIC24.12■■□□□ 1.45
MSH5O43196 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC24.12■■□□□ 1.45
MSH5O43196 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
MSH5O43196 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
MSH5O43196 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC24.12■■□□□ 1.45
MSH5O43196 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC24.12■■□□□ 1.45
MSH5O43196 GRAMD4P1-201ENST00000435181 1110 ntBASIC24.12■■□□□ 1.45
MSH5O43196 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC24.12■■□□□ 1.45
MSH5O43196 AC010486.3-201ENST00000511602 785 ntBASIC24.12■■□□□ 1.45
MSH5O43196 AC021269.1-201ENST00000526860 705 ntBASIC24.12■■□□□ 1.45
MSH5O43196 OR4A48P-201ENST00000531359 391 ntBASIC24.12■■□□□ 1.45
MSH5O43196 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
MSH5O43196 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC24.12■■□□□ 1.45
MSH5O43196 RNF126P1-202ENST00000569893 925 ntBASIC24.12■■□□□ 1.45
MSH5O43196 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC24.12■■□□□ 1.45
MSH5O43196 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
MSH5O43196 AL136038.4-201ENST00000603606 1261 ntBASIC24.12■■□□□ 1.45
MSH5O43196 AC026741.1-201ENST00000605892 482 ntBASIC24.12■■□□□ 1.45
MSH5O43196 BX640515.1-201ENST00000617215 977 ntBASIC24.12■■□□□ 1.45
MSH5O43196 AC020978.9-201ENST00000624380 1141 ntBASIC24.12■■□□□ 1.45
MSH5O43196 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC24.12■■□□□ 1.45
MSH5O43196 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
MSH5O43196 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
MSH5O43196 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
MSH5O43196 MTND4P4-201ENST00000439033 1366 ntBASIC24.12■■□□□ 1.45
MSH5O43196 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
MSH5O43196 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
MSH5O43196 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
MSH5O43196 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
MSH5O43196 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC24.12■■□□□ 1.45
MSH5O43196 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC24.12■■□□□ 1.45
MSH5O43196 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
MSH5O43196 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
MSH5O43196 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC24.11■■□□□ 1.45
MSH5O43196 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
MSH5O43196 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC24.11■■□□□ 1.45
MSH5O43196 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC24.11■■□□□ 1.45
MSH5O43196 FP475955.4-201ENST00000623131 1990 ntBASIC24.11■■□□□ 1.45
MSH5O43196 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
MSH5O43196 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC24.11■■□□□ 1.45
MSH5O43196 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
MSH5O43196 AC141586.5-201ENST00000624546 2050 ntBASIC24.11■■□□□ 1.45
MSH5O43196 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
MSH5O43196 ZNF626-201ENST00000291750 1123 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
MSH5O43196 LYG1-201ENST00000308528 990 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
MSH5O43196 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
MSH5O43196 AC006455.6-201ENST00000426192 893 ntBASIC24.11■■□□□ 1.45
MSH5O43196 MTND2P22-201ENST00000444325 1033 ntBASIC24.11■■□□□ 1.45
MSH5O43196 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC24.11■■□□□ 1.45
MSH5O43196 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC24.11■■□□□ 1.45
MSH5O43196 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
MSH5O43196 AC074051.2-201ENST00000565115 352 ntBASIC24.11■■□□□ 1.45
MSH5O43196 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
MSH5O43196 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms