Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNRC18O15417 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNRC18O15417 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNRC18O15417 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.93■□□□□ 0.62
TNRC18O15417 AL499627.1-201ENST00000569373 2188 ntBASIC18.93■□□□□ 0.62
TNRC18O15417 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
TNRC18O15417 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNRC18O15417 AC105129.2-201ENST00000559536 390 ntBASIC18.93■□□□□ 0.62
TNRC18O15417 AC016629.1-201ENST00000596579 586 ntBASIC18.93■□□□□ 0.62
TNRC18O15417 CASP16P-204ENST00000635032 809 ntBASIC18.93■□□□□ 0.62
TNRC18O15417 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TNRC18O15417 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TNRC18O15417 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNRC18O15417 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNRC18O15417 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNRC18O15417 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNRC18O15417 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNRC18O15417 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.93■□□□□ 0.62
TNRC18O15417 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNRC18O15417 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNRC18O15417 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.93■□□□□ 0.62
TNRC18O15417 CSF2RBP1-201ENST00000447905 391 ntBASIC18.93■□□□□ 0.62
TNRC18O15417 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNRC18O15417 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNRC18O15417 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.92■□□□□ 0.62
TNRC18O15417 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TNRC18O15417 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNRC18O15417 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNRC18O15417 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
TNRC18O15417 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.92■□□□□ 0.62
TNRC18O15417 AL844908.2-201ENST00000609461 460 ntBASIC18.92■□□□□ 0.62
TNRC18O15417 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNRC18O15417 AL590787.1-201ENST00000568856 1315 ntBASIC18.92■□□□□ 0.62
TNRC18O15417 SLC7A15P-201ENST00000424028 1363 ntBASIC18.92■□□□□ 0.62
TNRC18O15417 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNRC18O15417 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TNRC18O15417 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.92■□□□□ 0.62
TNRC18O15417 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.92■□□□□ 0.62
TNRC18O15417 AC103564.2-201ENST00000432853 1299 ntBASIC18.92■□□□□ 0.62
TNRC18O15417 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.92■□□□□ 0.62
TNRC18O15417 AC007389.4-201ENST00000454674 793 ntBASIC18.92■□□□□ 0.62
TNRC18O15417 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TNRC18O15417 SPCS2P2-201ENST00000603270 608 ntBASIC18.92■□□□□ 0.62
TNRC18O15417 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.92■□□□□ 0.62
TNRC18O15417 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNRC18O15417 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.92■□□□□ 0.62
TNRC18O15417 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.92■□□□□ 0.62
TNRC18O15417 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.92■□□□□ 0.62
TNRC18O15417 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNRC18O15417 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNRC18O15417 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNRC18O15417 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TNRC18O15417 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TNRC18O15417 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNRC18O15417 MIR346-201ENST00000362234 95 ntBASIC18.91■□□□□ 0.62
TNRC18O15417 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.91■□□□□ 0.62
TNRC18O15417 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.91■□□□□ 0.62
TNRC18O15417 GPAA1P2-201ENST00000417923 928 ntBASIC18.91■□□□□ 0.62
TNRC18O15417 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNRC18O15417 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.91■□□□□ 0.62
TNRC18O15417 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.91■□□□□ 0.62
TNRC18O15417 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNRC18O15417 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNRC18O15417 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.91■□□□□ 0.62
TNRC18O15417 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.91■□□□□ 0.62
TNRC18O15417 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
TNRC18O15417 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNRC18O15417 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNRC18O15417 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNRC18O15417 HINT2P1-201ENST00000419438 481 ntBASIC18.91■□□□□ 0.62
TNRC18O15417 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TNRC18O15417 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TNRC18O15417 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNRC18O15417 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.91■□□□□ 0.62
TNRC18O15417 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNRC18O15417 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNRC18O15417 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.91■□□□□ 0.62
TNRC18O15417 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNRC18O15417 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNRC18O15417 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNRC18O15417 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNRC18O15417 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNRC18O15417 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.9■□□□□ 0.62
TNRC18O15417 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.9■□□□□ 0.62
TNRC18O15417 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
TNRC18O15417 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.9■□□□□ 0.62
TNRC18O15417 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNRC18O15417 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.9■□□□□ 0.62
TNRC18O15417 AC079328.1-201ENST00000560358 952 ntBASIC18.9■□□□□ 0.62
TNRC18O15417 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.9■□□□□ 0.62
TNRC18O15417 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNRC18O15417 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TNRC18O15417 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNRC18O15417 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNRC18O15417 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TNRC18O15417 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNRC18O15417 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNRC18O15417 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.9■□□□□ 0.62
TNRC18O15417 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.9■□□□□ 0.62
TNRC18O15417 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms