Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SPTLC1O15269 BX005266.1-201ENST00000473402 457 ntBASIC18.87■□□□□ 0.61
SPTLC1O15269 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
SPTLC1O15269 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.87■□□□□ 0.61
SPTLC1O15269 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.87■□□□□ 0.61
SPTLC1O15269 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.87■□□□□ 0.61
SPTLC1O15269 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SPTLC1O15269 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.87■□□□□ 0.61
SPTLC1O15269 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.87■□□□□ 0.61
SPTLC1O15269 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.87■□□□□ 0.61
SPTLC1O15269 AC109462.3-201ENST00000573934 613 ntBASIC18.87■□□□□ 0.61
SPTLC1O15269 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 MIR7706-201ENST00000613747 67 ntBASIC18.87■□□□□ 0.61
SPTLC1O15269 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SPTLC1O15269 AL139288.1-201ENST00000623748 933 ntBASIC18.87■□□□□ 0.61
SPTLC1O15269 AC073592.4-201ENST00000623827 446 ntBASIC18.87■□□□□ 0.61
SPTLC1O15269 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPTLC1O15269 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPTLC1O15269 REXO1L11P-201ENST00000620964 1927 ntBASIC18.86■□□□□ 0.61
SPTLC1O15269 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPTLC1O15269 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPTLC1O15269 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SPTLC1O15269 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPTLC1O15269 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
SPTLC1O15269 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.86■□□□□ 0.61
SPTLC1O15269 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPTLC1O15269 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.86■□□□□ 0.61
SPTLC1O15269 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.86■□□□□ 0.61
SPTLC1O15269 SPDYE21P-201ENST00000413323 827 ntBASIC18.86■□□□□ 0.61
SPTLC1O15269 AC073648.2-201ENST00000510116 352 ntBASIC18.86■□□□□ 0.61
SPTLC1O15269 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPTLC1O15269 KRT18P58-201ENST00000527480 1120 ntBASIC18.86■□□□□ 0.61
SPTLC1O15269 AP001005.1-201ENST00000571755 1248 ntBASIC18.86■□□□□ 0.61
SPTLC1O15269 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPTLC1O15269 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.86■□□□□ 0.61
SPTLC1O15269 FAM215A-202ENST00000632077 792 ntBASIC18.86■□□□□ 0.61
SPTLC1O15269 AC012317.2-201ENST00000623305 2251 ntBASIC18.86■□□□□ 0.61
SPTLC1O15269 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPTLC1O15269 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPTLC1O15269 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPTLC1O15269 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.86■□□□□ 0.61
SPTLC1O15269 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SPTLC1O15269 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPTLC1O15269 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPTLC1O15269 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SPTLC1O15269 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.85■□□□□ 0.61
SPTLC1O15269 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SPTLC1O15269 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.85■□□□□ 0.61
SPTLC1O15269 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.85■□□□□ 0.61
SPTLC1O15269 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SPTLC1O15269 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.85■□□□□ 0.61
SPTLC1O15269 RPS2P1-201ENST00000434010 821 ntBASIC18.85■□□□□ 0.61
SPTLC1O15269 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.85■□□□□ 0.61
SPTLC1O15269 AC092865.5-201ENST00000545435 363 ntBASIC18.85■□□□□ 0.61
SPTLC1O15269 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.85■□□□□ 0.61
SPTLC1O15269 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SPTLC1O15269 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.85■□□□□ 0.61
SPTLC1O15269 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.85■□□□□ 0.61
SPTLC1O15269 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.85■□□□□ 0.61
SPTLC1O15269 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SPTLC1O15269 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 AC148477.5-201ENST00000625164 1645 ntBASIC18.85■□□□□ 0.61
SPTLC1O15269 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPTLC1O15269 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.85■□□□□ 0.61
SPTLC1O15269 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SPTLC1O15269 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.84■□□□□ 0.61
SPTLC1O15269 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPTLC1O15269 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.84■□□□□ 0.61
SPTLC1O15269 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPTLC1O15269 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPTLC1O15269 AC243591.1-201ENST00000452967 1364 ntBASIC18.84■□□□□ 0.61
SPTLC1O15269 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.84■□□□□ 0.61
SPTLC1O15269 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
SPTLC1O15269 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms