Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA3EO15041 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA3EO15041 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.16■□□□□ 0.98
SEMA3EO15041 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA3EO15041 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SEMA3EO15041 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA3EO15041 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SEMA3EO15041 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA3EO15041 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA3EO15041 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SEMA3EO15041 KRT18P13-201ENST00000400056 1290 ntBASIC21.16■□□□□ 0.98
SEMA3EO15041 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.16■□□□□ 0.98
SEMA3EO15041 LINC00982-205ENST00000420957 435 ntBASIC21.16■□□□□ 0.98
SEMA3EO15041 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SEMA3EO15041 ACTG1P4-201ENST00000425123 1122 ntBASIC21.16■□□□□ 0.98
SEMA3EO15041 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.16■□□□□ 0.98
SEMA3EO15041 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
SEMA3EO15041 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.16■□□□□ 0.98
SEMA3EO15041 RPS15P9-201ENST00000494093 319 ntBASIC21.16■□□□□ 0.98
SEMA3EO15041 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA3EO15041 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SEMA3EO15041 IGHV3-65-201ENST00000523210 341 ntBASIC21.16■□□□□ 0.98
SEMA3EO15041 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.16■□□□□ 0.98
SEMA3EO15041 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.16■□□□□ 0.98
SEMA3EO15041 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.16■□□□□ 0.98
SEMA3EO15041 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.16■□□□□ 0.98
SEMA3EO15041 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.16■□□□□ 0.98
SEMA3EO15041 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA3EO15041 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.16■□□□□ 0.98
SEMA3EO15041 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA3EO15041 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SEMA3EO15041 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA3EO15041 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA3EO15041 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
SEMA3EO15041 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA3EO15041 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.16■□□□□ 0.98
SEMA3EO15041 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SEMA3EO15041 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SEMA3EO15041 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
SEMA3EO15041 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA3EO15041 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA3EO15041 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA3EO15041 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA3EO15041 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.15■□□□□ 0.98
SEMA3EO15041 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA3EO15041 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SEMA3EO15041 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA3EO15041 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.15■□□□□ 0.98
SEMA3EO15041 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.15■□□□□ 0.98
SEMA3EO15041 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.15■□□□□ 0.98
SEMA3EO15041 RNA5SP416-201ENST00000516838 111 ntBASIC21.15■□□□□ 0.98
SEMA3EO15041 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.15■□□□□ 0.98
SEMA3EO15041 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA3EO15041 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA3EO15041 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SEMA3EO15041 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.15■□□□□ 0.98
SEMA3EO15041 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA3EO15041 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.15■□□□□ 0.98
SEMA3EO15041 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
SEMA3EO15041 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SEMA3EO15041 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA3EO15041 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA3EO15041 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SEMA3EO15041 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.14■□□□□ 0.98
SEMA3EO15041 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SEMA3EO15041 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SEMA3EO15041 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SEMA3EO15041 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SEMA3EO15041 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA3EO15041 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA3EO15041 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA3EO15041 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.14■□□□□ 0.97
SEMA3EO15041 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
SEMA3EO15041 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.14■□□□□ 0.97
SEMA3EO15041 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA3EO15041 BX842568.4-201ENST00000421222 227 ntBASIC21.14■□□□□ 0.97
SEMA3EO15041 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
SEMA3EO15041 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.14■□□□□ 0.97
SEMA3EO15041 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.14■□□□□ 0.97
SEMA3EO15041 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.14■□□□□ 0.97
SEMA3EO15041 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.14■□□□□ 0.97
SEMA3EO15041 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SEMA3EO15041 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.14■□□□□ 0.97
SEMA3EO15041 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SEMA3EO15041 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA3EO15041 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SEMA3EO15041 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA3EO15041 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA3EO15041 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.14■□□□□ 0.97
SEMA3EO15041 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA3EO15041 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.14■□□□□ 0.97
SEMA3EO15041 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA3EO15041 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA3EO15041 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SEMA3EO15041 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SEMA3EO15041 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SEMA3EO15041 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEMA3EO15041 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SEMA3EO15041 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEMA3EO15041 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms