Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
FOXN3O00409 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN3O00409 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
FOXN3O00409 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN3O00409 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN3O00409 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN3O00409 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
FOXN3O00409 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN3O00409 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN3O00409 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.88■□□□□ 0.61
FOXN3O00409 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN3O00409 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.88■□□□□ 0.61
FOXN3O00409 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.88■□□□□ 0.61
FOXN3O00409 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.88■□□□□ 0.61
FOXN3O00409 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.88■□□□□ 0.61
FOXN3O00409 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN3O00409 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXN3O00409 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXN3O00409 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN3O00409 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
FOXN3O00409 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN3O00409 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN3O00409 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN3O00409 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
FOXN3O00409 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
FOXN3O00409 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN3O00409 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN3O00409 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN3O00409 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN3O00409 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN3O00409 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN3O00409 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
FOXN3O00409 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN3O00409 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN3O00409 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.87■□□□□ 0.61
FOXN3O00409 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN3O00409 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN3O00409 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN3O00409 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.87■□□□□ 0.61
FOXN3O00409 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.87■□□□□ 0.61
FOXN3O00409 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN3O00409 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.87■□□□□ 0.61
FOXN3O00409 AP005901.3-202ENST00000581653 237 ntBASIC18.87■□□□□ 0.61
FOXN3O00409 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXN3O00409 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.87■□□□□ 0.61
FOXN3O00409 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN3O00409 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.87■□□□□ 0.61
FOXN3O00409 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.87■□□□□ 0.61
FOXN3O00409 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXN3O00409 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
FOXN3O00409 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN3O00409 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN3O00409 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXN3O00409 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN3O00409 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
FOXN3O00409 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN3O00409 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
FOXN3O00409 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXN3O00409 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN3O00409 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXN3O00409 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN3O00409 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXN3O00409 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.86■□□□□ 0.61
FOXN3O00409 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXN3O00409 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN3O00409 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN3O00409 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.86■□□□□ 0.61
FOXN3O00409 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN3O00409 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXN3O00409 AP002383.4-201ENST00000442518 975 ntBASIC18.86■□□□□ 0.61
FOXN3O00409 AC002558.1-201ENST00000488906 803 ntBASIC18.86■□□□□ 0.61
FOXN3O00409 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.86■□□□□ 0.61
FOXN3O00409 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.86■□□□□ 0.61
FOXN3O00409 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN3O00409 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXN3O00409 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
FOXN3O00409 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
FOXN3O00409 AC019129.2-201ENST00000609837 1235 ntBASIC18.86■□□□□ 0.61
FOXN3O00409 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN3O00409 AL139327.4-201ENST00000612362 153 ntBASIC18.86■□□□□ 0.61
FOXN3O00409 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
FOXN3O00409 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.86■□□□□ 0.61
FOXN3O00409 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXN3O00409 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXN3O00409 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN3O00409 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXN3O00409 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
FOXN3O00409 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXN3O00409 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
FOXN3O00409 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN3O00409 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
FOXN3O00409 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN3O00409 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN3O00409 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
FOXN3O00409 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN3O00409 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN3O00409 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN3O00409 IER3-202ENST00000376377 1350 ntBASIC18.85■□□□□ 0.61
FOXN3O00409 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXN3O00409 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms