Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.86■□□□□ 0.29
PDLIM1O00151 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PDLIM1O00151 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PDLIM1O00151 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.85■□□□□ 0.29
PDLIM1O00151 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
PDLIM1O00151 AGGF1P2-201ENST00000426656 2106 ntBASIC16.85■□□□□ 0.29
PDLIM1O00151 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PDLIM1O00151 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM1O00151 LINC02199-201ENST00000506655 2702 ntBASIC16.85■□□□□ 0.29
PDLIM1O00151 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.85■□□□□ 0.29
PDLIM1O00151 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM1O00151 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.85■□□□□ 0.29
PDLIM1O00151 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM1O00151 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
PDLIM1O00151 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM1O00151 MIR564-202ENST00000385049 94 ntBASIC16.85■□□□□ 0.29
PDLIM1O00151 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.85■□□□□ 0.29
PDLIM1O00151 MIR1238-201ENST00000408483 83 ntBASIC16.85■□□□□ 0.29
PDLIM1O00151 AL390955.1-201ENST00000428694 934 ntBASIC16.85■□□□□ 0.29
PDLIM1O00151 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM1O00151 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM1O00151 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM1O00151 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
PDLIM1O00151 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PDLIM1O00151 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM1O00151 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
PDLIM1O00151 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.85■□□□□ 0.29
PDLIM1O00151 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.85■□□□□ 0.29
PDLIM1O00151 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 KRT8P9-201ENST00000558927 1449 ntBASIC16.85■□□□□ 0.29
PDLIM1O00151 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.85■□□□□ 0.29
PDLIM1O00151 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM1O00151 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM1O00151 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.85■□□□□ 0.29
PDLIM1O00151 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PDLIM1O00151 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.84■□□□□ 0.29
PDLIM1O00151 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.84■□□□□ 0.29
PDLIM1O00151 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PDLIM1O00151 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PDLIM1O00151 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
PDLIM1O00151 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.84■□□□□ 0.29
PDLIM1O00151 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.84■□□□□ 0.29
PDLIM1O00151 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.84■□□□□ 0.29
PDLIM1O00151 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.84■□□□□ 0.29
PDLIM1O00151 CKBP1-201ENST00000565489 1086 ntBASIC16.84■□□□□ 0.29
PDLIM1O00151 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.84■□□□□ 0.29
PDLIM1O00151 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.84■□□□□ 0.29
PDLIM1O00151 AC012306.2-201ENST00000609350 630 ntBASIC16.84■□□□□ 0.29
PDLIM1O00151 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.84■□□□□ 0.29
PDLIM1O00151 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.84■□□□□ 0.29
PDLIM1O00151 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.84■□□□□ 0.29
PDLIM1O00151 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PDLIM1O00151 AC008741.2-201ENST00000612792 3115 ntBASIC16.84■□□□□ 0.29
PDLIM1O00151 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.84■□□□□ 0.29
PDLIM1O00151 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 AC133963.1-201ENST00000504166 1679 ntBASIC16.84■□□□□ 0.29
PDLIM1O00151 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.84■□□□□ 0.29
PDLIM1O00151 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM1O00151 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.84■□□□□ 0.29
PDLIM1O00151 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms