Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 AC004832.2-201ENST00000426397 482 ntBASIC15.44■□□□□ 0.06
MBD3L5A6NJ08 PRSS29P-201ENST00000440800 595 ntBASIC15.44■□□□□ 0.06
MBD3L5A6NJ08 DNAJB3-201ENST00000446806 729 ntBASIC15.44■□□□□ 0.06
MBD3L5A6NJ08 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.44■□□□□ 0.06
MBD3L5A6NJ08 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.44■□□□□ 0.06
MBD3L5A6NJ08 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.44■□□□□ 0.06
MBD3L5A6NJ08 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.44■□□□□ 0.06
MBD3L5A6NJ08 AC002347.1-201ENST00000569543 541 ntBASIC15.44■□□□□ 0.06
MBD3L5A6NJ08 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.44■□□□□ 0.06
MBD3L5A6NJ08 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.44■□□□□ 0.06
MBD3L5A6NJ08 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
MBD3L5A6NJ08 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
MBD3L5A6NJ08 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
MBD3L5A6NJ08 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
MBD3L5A6NJ08 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 REXO1L11P-201ENST00000620964 1927 ntBASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 AP002414.1-201ENST00000391405 1147 ntBASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 YBX2P1-201ENST00000394192 760 ntBASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 UPF3AP3-201ENST00000420996 769 ntBASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 MIR4751-201ENST00000578027 74 ntBASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 LINC01451-201ENST00000623792 534 ntBASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L5A6NJ08 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 VN2R19P-201ENST00000442399 1052 ntBASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 GGTLC5P-201ENST00000617623 998 ntBASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L5A6NJ08 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms