Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 PTCHD3P3-201ENST00000403073 906 ntBASIC18.25■□□□□ 0.51
XIRP2A4UGR9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 AL135744.1-201ENST00000565098 629 ntBASIC18.25■□□□□ 0.51
XIRP2A4UGR9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.25■□□□□ 0.51
XIRP2A4UGR9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 AL662799.1-202ENST00000614205 422 ntBASIC18.24■□□□□ 0.51
XIRP2A4UGR9 CU639417.3-201ENST00000624240 1404 ntBASIC18.24■□□□□ 0.51
XIRP2A4UGR9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 MIR1909-201ENST00000411312 80 ntBASIC18.24■□□□□ 0.51
XIRP2A4UGR9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 AC243562.1-201ENST00000560672 389 ntBASIC18.24■□□□□ 0.51
XIRP2A4UGR9 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 AC006116.8-202ENST00000587620 1550 ntBASIC18.24■□□□□ 0.51
XIRP2A4UGR9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 AL358472.5-202ENST00000641448 1267 ntBASIC18.24■□□□□ 0.51
XIRP2A4UGR9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
XIRP2A4UGR9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 SLC25A39P2-201ENST00000537614 270 ntBASIC18.23■□□□□ 0.51
XIRP2A4UGR9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
XIRP2A4UGR9 AC004890.2-204ENST00000481968 304 ntBASIC18.22■□□□□ 0.51
XIRP2A4UGR9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms