Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 AP002383.4-201ENST00000442518 975 ntBASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 TNRC18P3-201ENST00000441896 2691 ntBASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 KRT18P1-202ENST00000452408 1331 ntBASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC162PA2VCL2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 COX5BP2-201ENST00000392354 334 ntBASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 AC007967.3-201ENST00000434308 558 ntBASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 AP005901.3-202ENST00000581653 237 ntBASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 AL138831.2-201ENST00000606564 490 ntBASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 AL138688.1-201ENST00000624851 1594 ntBASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC162PA2VCL2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC162PA2VCL2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.64■□□□□ 0.42
CCDC162PA2VCL2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 AL645608.8-201ENST00000606034 2086 ntBASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 AC005104.2-201ENST00000427818 678 ntBASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC162PA2VCL2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms