Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TBC1D3EA0A087X179 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3EA0A087X179 AL589182.2-201ENST00000619332 1049 ntBASIC17.55■□□□□ 0.4
TBC1D3EA0A087X179 PGM5P2-202ENST00000637225 1043 ntBASIC17.55■□□□□ 0.4
TBC1D3EA0A087X179 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.55■□□□□ 0.4
TBC1D3EA0A087X179 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3EA0A087X179 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.55■□□□□ 0.4
TBC1D3EA0A087X179 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3EA0A087X179 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3EA0A087X179 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.55■□□□□ 0.4
TBC1D3EA0A087X179 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3EA0A087X179 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
TBC1D3EA0A087X179 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 BX842568.4-201ENST00000421222 227 ntBASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 SIGLEC30P-201ENST00000455569 941 ntBASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 IGHV3-52-201ENST00000519770 353 ntBASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 AC139530.3-201ENST00000620344 690 ntBASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 AC104581.1-202ENST00000635932 2618 ntBASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TBC1D3EA0A087X179 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 AC003669.1-201ENST00000334569 611 ntBASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 KRT18P3-201ENST00000451602 1288 ntBASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 STK19B-204ENST00000512515 211 ntBASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 AC148477.5-201ENST00000625164 1645 ntBASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3EA0A087X179 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.52■□□□□ 0.4
TBC1D3EA0A087X179 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3EA0A087X179 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3EA0A087X179 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
TBC1D3EA0A087X179 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3EA0A087X179 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3EA0A087X179 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3EA0A087X179 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TBC1D3EA0A087X179 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms