Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 MIR3197-201ENST00000582241 73 ntBASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 AC011467.4-201ENST00000594891 528 ntBASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 AC105339.1-204ENST00000636249 355 ntBASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN10AQ9Y5Y9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 PI4KAP1-204ENST00000612579 1703 ntBASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 FLJ13224-201ENST00000313737 1514 ntBASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 AC109322.1-201ENST00000524499 1264 ntBASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 AC106028.4-201ENST00000614509 607 ntBASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN10AQ9Y5Y9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 SLC25A6P2-201ENST00000497974 877 ntBASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 AL513480.1-201ENST00000451731 511 ntBASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 AC009093.7-201ENST00000623853 1223 ntBASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SCN10AQ9Y5Y9 TNXA-203ENST00000507684 2038 ntBASIC19.14■□□□□ 0.66
SCN10AQ9Y5Y9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SCN10AQ9Y5Y9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SCN10AQ9Y5Y9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
SCN10AQ9Y5Y9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 MIR770-201ENST00000390219 98 ntBASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 HLA-J-203ENST00000494367 1087 ntBASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 AC129492.6-201ENST00000611383 1305 ntBASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN10AQ9Y5Y9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms