Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 AC009949.1-201ENST00000623048 1830 ntBASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 AKR1C7P-201ENST00000305623 895 ntBASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 AL031008.1-201ENST00000619963 541 ntBASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 REXO1L6P-202ENST00000619970 1078 ntBASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
COL4A3BPQ9Y5P4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL4A3BPQ9Y5P4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
COL4A3BPQ9Y5P4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
COL4A3BPQ9Y5P4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 DDX43P3-201ENST00000441064 443 ntBASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.76■□□□□ 0.75
COL4A3BPQ9Y5P4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 AC079781.3-201ENST00000449110 356 ntBASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 SAPCD2P3-201ENST00000455031 850 ntBASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
COL4A3BPQ9Y5P4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms