Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.39■□□□□ 0.86
CTDP1Q9Y5B0 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.39■□□□□ 0.86
CTDP1Q9Y5B0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.39■□□□□ 0.86
CTDP1Q9Y5B0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 IGHV3-22-201ENST00000520721 359 ntBASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTDP1Q9Y5B0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 AL020989.1-201ENST00000422979 469 ntBASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 RNA5SP415-201ENST00000517246 115 ntBASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 AC006557.2-201ENST00000592985 1240 ntBASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 AC027601.4-201ENST00000611259 610 ntBASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 AC098818.2-201ENST00000564925 2320 ntBASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 AC004817.3-201ENST00000602957 2129 ntBASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTDP1Q9Y5B0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 AP002414.3-201ENST00000589352 1468 ntBASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 AC093503.3-201ENST00000624917 2352 ntBASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 OR6D1P-203ENST00000641209 4860 ntBASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 SPDYE21P-201ENST00000413323 827 ntBASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 MED15P5-201ENST00000423150 992 ntBASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 AC145285.3-201ENST00000564603 959 ntBASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 Z83851.2-201ENST00000609564 659 ntBASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CTDP1Q9Y5B0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms