Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 AP000523.1-201ENST00000398242 1049 ntBASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 TSPY5P-201ENST00000426936 936 ntBASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 AC005104.2-201ENST00000427818 678 ntBASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 YBX1P2-201ENST00000489612 999 ntBASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 AL023973.1-201ENST00000624619 620 ntBASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.77■□□□□ 0.59
SALL4Q9UJQ4 AC105020.1-201ENST00000435356 2205 ntBASIC18.77■□□□□ 0.59
SALL4Q9UJQ4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.77■□□□□ 0.59
SALL4Q9UJQ4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SALL4Q9UJQ4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SALL4Q9UJQ4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SALL4Q9UJQ4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SALL4Q9UJQ4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 RASA4DP-201ENST00000460726 1199 ntBASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 AC018695.7-201ENST00000624587 2492 ntBASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 AC116353.5-201ENST00000638148 1699 ntBASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SALL4Q9UJQ4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL4Q9UJQ4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms