Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AL590627.1-203ENST00000421194 1026 ntBASIC16.62■□□□□ 0.25
CTSFQ9UBX1 RPS2P1-201ENST00000434010 821 ntBASIC16.62■□□□□ 0.25
CTSFQ9UBX1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 NKAPP1-205ENST00000585790 367 ntBASIC16.62■□□□□ 0.25
CTSFQ9UBX1 AC025062.2-201ENST00000605477 670 ntBASIC16.62■□□□□ 0.25
CTSFQ9UBX1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 AD001527.2-201ENST00000622994 785 ntBASIC16.62■□□□□ 0.25
CTSFQ9UBX1 FAM215A-202ENST00000632077 792 ntBASIC16.62■□□□□ 0.25
CTSFQ9UBX1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 AC243591.1-201ENST00000452967 1364 ntBASIC16.62■□□□□ 0.25
CTSFQ9UBX1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTSFQ9UBX1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 AC103564.2-201ENST00000432853 1299 ntBASIC16.61■□□□□ 0.25
CTSFQ9UBX1 BX005266.1-201ENST00000473402 457 ntBASIC16.61■□□□□ 0.25
CTSFQ9UBX1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CTSFQ9UBX1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 KRT18P55-202ENST00000578578 1546 ntBASIC16.6■□□□□ 0.25
CTSFQ9UBX1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 AC079776.2-201ENST00000641154 1609 ntBASIC16.6■□□□□ 0.25
CTSFQ9UBX1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 AC004817.3-201ENST00000602957 2129 ntBASIC16.6■□□□□ 0.25
CTSFQ9UBX1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 DDX43P3-201ENST00000441064 443 ntBASIC16.6■□□□□ 0.25
CTSFQ9UBX1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 BX640515.1-201ENST00000617215 977 ntBASIC16.6■□□□□ 0.25
CTSFQ9UBX1 AC073592.5-201ENST00000624854 528 ntBASIC16.6■□□□□ 0.25
CTSFQ9UBX1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CTSFQ9UBX1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms