Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
COMMD9Q9P000 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 KRT16P1-201ENST00000399124 1418 ntBASIC15.11■□□□□ 0.01
COMMD9Q9P000 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.11■□□□□ 0.01
COMMD9Q9P000 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.11■□□□□ 0.01
COMMD9Q9P000 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.11■□□□□ 0.01
COMMD9Q9P000 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.11■□□□□ 0.01
COMMD9Q9P000 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.11■□□□□ 0.01
COMMD9Q9P000 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.11■□□□□ 0.01
COMMD9Q9P000 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 ESRRAP1-201ENST00000400596 1257 ntBASIC15.11■□□□□ 0.01
COMMD9Q9P000 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.11■□□□□ 0.01
COMMD9Q9P000 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.11■□□□□ 0.01
COMMD9Q9P000 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.11■□□□□ 0.01
COMMD9Q9P000 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.11■□□□□ 0.01
COMMD9Q9P000 RN7SL471P-201ENST00000580476 299 ntBASIC15.11■□□□□ 0.01
COMMD9Q9P000 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
COMMD9Q9P000 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.11■□□□□ 0.01
COMMD9Q9P000 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
COMMD9Q9P000 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 HTR7P1-201ENST00000538670 1336 ntBASIC15.11■□□□□ 0.01
COMMD9Q9P000 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.11■□□□□ 0.01
COMMD9Q9P000 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COMMD9Q9P000 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
COMMD9Q9P000 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
COMMD9Q9P000 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.1■□□□□ 0.01
COMMD9Q9P000 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.1■□□□□ 0.01
COMMD9Q9P000 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
COMMD9Q9P000 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
COMMD9Q9P000 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.1■□□□□ 0.01
COMMD9Q9P000 CKBP1-201ENST00000565489 1086 ntBASIC15.1■□□□□ 0.01
COMMD9Q9P000 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.1■□□□□ 0.01
COMMD9Q9P000 AL031985.4-201ENST00000642138 673 ntBASIC15.1■□□□□ 0.01
COMMD9Q9P000 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 RCC2P3-201ENST00000418112 1537 ntBASIC15.1■□□□□ 0.01
COMMD9Q9P000 KRT18P55-202ENST00000578578 1546 ntBASIC15.1■□□□□ 0.01
COMMD9Q9P000 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.1■□□□□ 0.01
COMMD9Q9P000 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
COMMD9Q9P000 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.1■□□□□ 0.01
COMMD9Q9P000 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.1■□□□□ 0.01
COMMD9Q9P000 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD9Q9P000 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
COMMD9Q9P000 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.09■□□□□ 0.01
COMMD9Q9P000 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD9Q9P000 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD9Q9P000 CROCCP2-202ENST00000412962 2773 ntBASIC15.09■□□□□ 0.01
COMMD9Q9P000 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD9Q9P000 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.09■□□□□ 0.01
COMMD9Q9P000 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD9Q9P000 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
COMMD9Q9P000 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms