Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 AC103564.2-201ENST00000432853 1299 ntBASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 FGFR3P6-201ENST00000457012 610 ntBASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 AC109462.3-201ENST00000573934 613 ntBASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 AL355877.3-201ENST00000622820 899 ntBASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 TP73-AS1-207ENST00000624167 988 ntBASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SPHK1Q9NYA1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17■□□□□ 0.31
SPHK1Q9NYA1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SPHK1Q9NYA1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17■□□□□ 0.31
SPHK1Q9NYA1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPHK1Q9NYA1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17■□□□□ 0.31
SPHK1Q9NYA1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPHK1Q9NYA1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPHK1Q9NYA1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17■□□□□ 0.31
SPHK1Q9NYA1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPHK1Q9NYA1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SPHK1Q9NYA1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPHK1Q9NYA1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SPHK1Q9NYA1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPHK1Q9NYA1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPHK1Q9NYA1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPHK1Q9NYA1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17■□□□□ 0.31
SPHK1Q9NYA1 RBM17P3-201ENST00000417687 1192 ntBASIC17■□□□□ 0.31
SPHK1Q9NYA1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17■□□□□ 0.31
SPHK1Q9NYA1 PMPCAP1-201ENST00000508114 1576 ntBASIC17■□□□□ 0.31
SPHK1Q9NYA1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SPHK1Q9NYA1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17■□□□□ 0.31
SPHK1Q9NYA1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SPHK1Q9NYA1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SPHK1Q9NYA1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPHK1Q9NYA1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPHK1Q9NYA1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SPHK1Q9NYA1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPHK1Q9NYA1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17■□□□□ 0.31
SPHK1Q9NYA1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SPHK1Q9NYA1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17■□□□□ 0.31
SPHK1Q9NYA1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 AL353593.2-201ENST00000602529 1483 ntBASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPHK1Q9NYA1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SPHK1Q9NYA1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SPHK1Q9NYA1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPHK1Q9NYA1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SPHK1Q9NYA1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.98■□□□□ 0.31
SPHK1Q9NYA1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.98■□□□□ 0.31
SPHK1Q9NYA1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SPHK1Q9NYA1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms