Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTA1Q9NP79 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTA1Q9NP79 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VTA1Q9NP79 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTA1Q9NP79 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTA1Q9NP79 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTA1Q9NP79 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTA1Q9NP79 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VTA1Q9NP79 AC093503.3-201ENST00000624917 2352 ntBASIC19.68■□□□□ 0.74
VTA1Q9NP79 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTA1Q9NP79 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTA1Q9NP79 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTA1Q9NP79 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VTA1Q9NP79 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTA1Q9NP79 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTA1Q9NP79 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 ALG1L5P-201ENST00000482043 771 ntBASIC19.67■□□□□ 0.74
VTA1Q9NP79 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 AL513190.1-201ENST00000621254 727 ntBASIC19.67■□□□□ 0.74
VTA1Q9NP79 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTA1Q9NP79 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTA1Q9NP79 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VTA1Q9NP79 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.67■□□□□ 0.74
VTA1Q9NP79 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTA1Q9NP79 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTA1Q9NP79 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTA1Q9NP79 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTA1Q9NP79 FLJ13224-201ENST00000313737 1514 ntBASIC19.66■□□□□ 0.74
VTA1Q9NP79 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
VTA1Q9NP79 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.66■□□□□ 0.74
VTA1Q9NP79 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
VTA1Q9NP79 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTA1Q9NP79 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTA1Q9NP79 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VTA1Q9NP79 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.66■□□□□ 0.74
VTA1Q9NP79 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
VTA1Q9NP79 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.66■□□□□ 0.74
VTA1Q9NP79 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.66■□□□□ 0.74
VTA1Q9NP79 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.66■□□□□ 0.74
VTA1Q9NP79 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.66■□□□□ 0.74
VTA1Q9NP79 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTA1Q9NP79 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.66■□□□□ 0.74
VTA1Q9NP79 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VTA1Q9NP79 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTA1Q9NP79 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTA1Q9NP79 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VTA1Q9NP79 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTA1Q9NP79 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.66■□□□□ 0.74
VTA1Q9NP79 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
VTA1Q9NP79 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.65■□□□□ 0.74
VTA1Q9NP79 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 ACTG1P4-201ENST00000425123 1122 ntBASIC19.65■□□□□ 0.74
VTA1Q9NP79 MKNK2P1-201ENST00000437526 628 ntBASIC19.65■□□□□ 0.74
VTA1Q9NP79 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.65■□□□□ 0.74
VTA1Q9NP79 AC096734.2-201ENST00000562054 433 ntBASIC19.65■□□□□ 0.74
VTA1Q9NP79 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.65■□□□□ 0.74
VTA1Q9NP79 MIR4469-201ENST00000583919 79 ntBASIC19.65■□□□□ 0.74
VTA1Q9NP79 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.65■□□□□ 0.74
VTA1Q9NP79 AC010507.1-201ENST00000633895 436 ntBASIC19.65■□□□□ 0.74
VTA1Q9NP79 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.65■□□□□ 0.74
VTA1Q9NP79 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VTA1Q9NP79 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTA1Q9NP79 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VTA1Q9NP79 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms