Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.8■□□□□ 0.44
VPS11Q9H270 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.8■□□□□ 0.44
VPS11Q9H270 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.8■□□□□ 0.44
VPS11Q9H270 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
VPS11Q9H270 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS11Q9H270 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.8■□□□□ 0.44
VPS11Q9H270 LINC01451-201ENST00000623792 534 ntBASIC17.8■□□□□ 0.44
VPS11Q9H270 AL157888.1-201ENST00000631930 593 ntBASIC17.8■□□□□ 0.44
VPS11Q9H270 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
VPS11Q9H270 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.8■□□□□ 0.44
VPS11Q9H270 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS11Q9H270 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VPS11Q9H270 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
VPS11Q9H270 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS11Q9H270 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS11Q9H270 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VPS11Q9H270 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS11Q9H270 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.8■□□□□ 0.44
VPS11Q9H270 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS11Q9H270 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VPS11Q9H270 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS11Q9H270 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS11Q9H270 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
VPS11Q9H270 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.79■□□□□ 0.44
VPS11Q9H270 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VPS11Q9H270 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.79■□□□□ 0.44
VPS11Q9H270 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.79■□□□□ 0.44
VPS11Q9H270 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.79■□□□□ 0.44
VPS11Q9H270 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.79■□□□□ 0.44
VPS11Q9H270 AL512604.3-201ENST00000569583 964 ntBASIC17.79■□□□□ 0.44
VPS11Q9H270 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.79■□□□□ 0.44
VPS11Q9H270 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.79■□□□□ 0.44
VPS11Q9H270 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.79■□□□□ 0.44
VPS11Q9H270 AP006294.2-201ENST00000641667 209 ntBASIC17.79■□□□□ 0.44
VPS11Q9H270 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.79■□□□□ 0.44
VPS11Q9H270 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS11Q9H270 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
VPS11Q9H270 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.79■□□□□ 0.44
VPS11Q9H270 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS11Q9H270 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
VPS11Q9H270 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
VPS11Q9H270 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS11Q9H270 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS11Q9H270 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS11Q9H270 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
VPS11Q9H270 AC009949.1-201ENST00000623048 1830 ntBASIC17.78■□□□□ 0.44
VPS11Q9H270 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS11Q9H270 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS11Q9H270 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS11Q9H270 PVRIG2P-201ENST00000435460 978 ntBASIC17.78■□□□□ 0.44
VPS11Q9H270 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS11Q9H270 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS11Q9H270 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS11Q9H270 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.78■□□□□ 0.44
VPS11Q9H270 FAM87A-204ENST00000613235 858 ntBASIC17.78■□□□□ 0.44
VPS11Q9H270 AC116407.2-201ENST00000613639 860 ntBASIC17.78■□□□□ 0.44
VPS11Q9H270 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.78■□□□□ 0.44
VPS11Q9H270 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
VPS11Q9H270 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS11Q9H270 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS11Q9H270 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VPS11Q9H270 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
VPS11Q9H270 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS11Q9H270 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS11Q9H270 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.78■□□□□ 0.44
VPS11Q9H270 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS11Q9H270 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS11Q9H270 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VPS11Q9H270 AC106886.4-201ENST00000623557 2502 ntBASIC17.77■□□□□ 0.44
VPS11Q9H270 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS11Q9H270 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS11Q9H270 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS11Q9H270 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS11Q9H270 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS11Q9H270 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS11Q9H270 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS11Q9H270 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
VPS11Q9H270 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
VPS11Q9H270 HMGA1P5-201ENST00000412453 271 ntBASIC17.77■□□□□ 0.44
VPS11Q9H270 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS11Q9H270 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS11Q9H270 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS11Q9H270 NEK4P2-201ENST00000580004 1012 ntBASIC17.77■□□□□ 0.44
VPS11Q9H270 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms