Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 MIR940-201ENST00000401276 94 ntBASIC18.27■□□□□ 0.52
RNF38Q9H0F5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 AC034105.1-201ENST00000563488 319 ntBASIC18.27■□□□□ 0.52
RNF38Q9H0F5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF38Q9H0F5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF38Q9H0F5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF38Q9H0F5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF38Q9H0F5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
RNF38Q9H0F5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF38Q9H0F5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF38Q9H0F5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF38Q9H0F5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF38Q9H0F5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 AC073621.1-201ENST00000392730 636 ntBASIC18.26■□□□□ 0.51
RNF38Q9H0F5 KRT18P27-201ENST00000427733 1299 ntBASIC18.26■□□□□ 0.51
RNF38Q9H0F5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF38Q9H0F5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 STK25P1-201ENST00000585406 838 ntBASIC18.25■□□□□ 0.51
RNF38Q9H0F5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 AC117500.6-201ENST00000624871 588 ntBASIC18.25■□□□□ 0.51
RNF38Q9H0F5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF38Q9H0F5 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms