Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 TMEM261P1-201ENST00000604899 340 ntBASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 AC008667.4-201ENST00000607370 168 ntBASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 DDX43P3-201ENST00000441064 443 ntBASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 AC113404.2-201ENST00000507884 177 ntBASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 AC010654.1-201ENST00000615722 808 ntBASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 AC004706.3-202ENST00000621574 984 ntBASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNTNAP3Q9BZ76 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CNTNAP3Q9BZ76 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNTNAP3Q9BZ76 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNTNAP3Q9BZ76 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CNTNAP3Q9BZ76 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.77■□□□□ 0.27
CNTNAP3Q9BZ76 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.77■□□□□ 0.27
CNTNAP3Q9BZ76 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 HCG4-201ENST00000418983 998 ntBASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 RHOQP3-201ENST00000437982 621 ntBASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 PRYP5-201ENST00000451909 266 ntBASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 TIMM8BP1-201ENST00000452384 211 ntBASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.76■□□□□ 0.27
CNTNAP3Q9BZ76 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms